From bd448d5c60454640610681515538be3ec66036e4 Mon Sep 17 00:00:00 2001 From: Daniel VM <69470278+Daniel-VM@users.noreply.github.com> Date: Wed, 13 Sep 2023 11:12:23 +0200 Subject: [PATCH] fix empty channel assignment in FASTQ_TRIM_FASTP_FASTQC subworkflow (#3815) fix empty channel assignment --- subworkflows/nf-core/fastq_trim_fastp_fastqc/main.nf | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/subworkflows/nf-core/fastq_trim_fastp_fastqc/main.nf b/subworkflows/nf-core/fastq_trim_fastp_fastqc/main.nf index 182d8de272e..4f1c84fcf26 100644 --- a/subworkflows/nf-core/fastq_trim_fastp_fastqc/main.nf +++ b/subworkflows/nf-core/fastq_trim_fastp_fastqc/main.nf @@ -35,8 +35,8 @@ workflow FASTQ_TRIM_FASTP_FASTQC { FASTQC_RAW ( ch_reads ) - fastqc_raw_html = FASTQC_RAW.out.html - fastqc_raw_zip = FASTQC_RAW.out.zip + ch_fastqc_raw_html = FASTQC_RAW.out.html + ch_fastqc_raw_zip = FASTQC_RAW.out.zip ch_versions = ch_versions.mix(FASTQC_RAW.out.versions.first()) }