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@Fluorescence-Tools

fluorescence tools

A hub for community driven open source fluorescence spectroscopy software

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  1. tttrlib tttrlib Public

    File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy (Sample data: https://gitlab.peulen.xyz/skf…

    C++ 19 1

  2. chisurf chisurf Public

    Global analysis platform for fluorescence data

    Python 13 1

  3. LabelLib LabelLib Public

    Library for coarse-grained simulations of probes flexibly coupled to biomolecules.

    C++ 9 3

  4. FRETlines FRETlines Public

    Jupyter Notebook 4

  5. FRETrest FRETrest Public

    Helper scripts for FRET-restrained MD simulations. Generate AMBER restraint files (DISANG).

    Python 3

  6. Olga Olga Public

    FRET-screening of conformations and experiment planning

    C++ 3 2

Repositories

Showing 10 of 38 repositories
  • tttrlib Public

    File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy (Sample data: https://gitlab.peulen.xyz/skf/tttr-data)

    Fluorescence-Tools/tttrlib’s past year of commit activity
    C++ 19 BSD-3-Clause 1 3 0 Updated Oct 27, 2024
  • chisurf Public

    Global analysis platform for fluorescence data

    Fluorescence-Tools/chisurf’s past year of commit activity
    Python 13 GPL-2.0 1 12 (1 issue needs help) 0 Updated Oct 11, 2024
  • flr2mmcif Public Forked from CAHanke/flr2mmcif

    Convert a spreadsheet with fluorescence information to a mmcif file for deposition in PDB-Dev

    Fluorescence-Tools/flr2mmcif’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Oct 10, 2024
  • IMP.bff Public

    IMP's Bayesian Fluorescence Framework

    Fluorescence-Tools/IMP.bff’s past year of commit activity
    C++ 1 LGPL-2.1 0 0 0 Updated Apr 18, 2024
  • ndxplorer Public

    Histograms of multidimensional data

    Fluorescence-Tools/ndxplorer’s past year of commit activity
    Python 0 GPL-2.0 0 0 0 Updated Apr 1, 2024
  • clsmview Public

    CLSM viewer for ChiSurf

    Fluorescence-Tools/clsmview’s past year of commit activity
    Python 0 GPL-2.0 0 0 0 Updated Mar 25, 2024
  • k2dist Public

    Compute and visualize orientation factor (kappa2) distributions

    Fluorescence-Tools/k2dist’s past year of commit activity
    Python 0 GPL-2.0 0 0 0 Updated Mar 25, 2024
  • tttrconvert Public

    A simple converter for tttr files

    Fluorescence-Tools/tttrconvert’s past year of commit activity
    Python 0 GPL-2.0 0 0 0 Updated Feb 17, 2024
  • fit2x Public

    Maximum likelihood fits for low photon count data - For active develeopment visit gitlab.peulen.xyz

    Fluorescence-Tools/fit2x’s past year of commit activity
    C++ 3 MPL-2.0 0 0 0 Updated Feb 12, 2024
  • SAXS_score Public Forked from mpopara/SAXS_score

    Python script to fit and score theoretical ensemble-averaged SAXS profile against experimental SAXS data

    Fluorescence-Tools/SAXS_score’s past year of commit activity
    Python 1 MPL-2.0 1 0 0 Updated Sep 19, 2023
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