NA to stdout but in summary its called

[CarolineOhrman]

I get this snp file

Brucella_suis_GCF_900446155.1_snps.txt

Name	Reference	Pos	Ancestral base	Derived base	Target base
B1	abortus2308	816816	C	T	T
SCa1	abortus2308	1093693	T	C	C
SCa2	abortus2308	1937257	G	A	A
SCa3	abortus2308	1545870	C	T	T
S1	abortus2308	334540	C	T	T
SNP path: B1;SCa1;SCa2;SCa3;S1
Final SNP: NA found/depth: 0/8

But the summary snp_summary gives a snp S1

Brucella_abortus_GCF_000292145.1_snps.txt: Me5
Brucella_pinnipedialis_GCF_015624465.1_snps.txt: Pi1
Brucella_sp_63_311_GCF_000370945.1_snps.txt: Bsp2
Brucella_sp_NF_2653_GCF_000177155.1_snps.txt: Bsp1
Brucella_melitensis_GCF_002191935.1_snps.txt: Me1
Brucella_neotomae_GCF_900446125.1_snps.txt: N1
Brucella_microti_GCF_000022745.1_snps.txt: Mi1
Brucella_abortus_GCF_000365765.1_snps.txt: A3
Brucella_abortus_GCA_000742215.1_snps.txt: A6
Brucella_canis_GCF_001715445.1_snps.txt: Ca1
Brucella_abortus_GCF_000292205.1_snps.txt: SCa2
Brucella_inopinata_GCA_000662015.2_snps.txt: S4
Brucella_abortus_GCF_000370345.1_snps.txt: A7
Brucella_abortus_GCF_023651395.1_snps.txt: A5
**Brucella_suis_GCF_900446155.1_snps.txt: S1**
Brucella_ceti_GCF_002245555.1_snps.txt: Ce2
Brucella_melitensis_GCF_000740355.1_snps.txt: Me3
Brucella_sp_BO3_GCF_014084005.1_snps.txt: I1
Brucella_vulpis_GCA_900000005.1_snps.txt: V1
Brucella_ceti_GCF_000158755.1_snps.txt: Ce3
Brucella_melitensis_GCF_023796775.1_snps.txt: Me2
Brucella_ovis_GCF_000016845.1_snps.txt: O1
Brucella_suis_GCF_000740235.1_snps.txt: S5
Brucella_sp_F5_06_GCF_000370985.1_snps.txt: Ce1
Brucella_sp_NVSL_07_0026_GCF_000163135.1_snps.txt: Pa1
Brucella_sp_458_GCF_017797885.1_snps.txt: IBsp1
Brucella_suis_GCF_000742055.1_snps.txt: S2