e3sm-gh-tools-mkatmsrffile-test.yml

name: mkatmsrffile

on:
  push:
    branches: [ master ]
  pull_request:
    branches: [ master ]
    paths:
      - 'components/eam/tools/mkatmsrffile/mkatmsrffile.py'
  schedule:
    - cron: '00 15 * * 2'
  workflow_dispatch:

jobs:
  mkatmsrffile-test:
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -l {0}
    outputs:
      event_name: ${{ github.event_name }}
    steps:
      - 
        name: Repository checkout
        uses: actions/checkout@v4
        with:
          show-progress: false
          submodules: false
      - 
        name: Conda setup
        uses: conda-incubator/setup-miniconda@v3
        with:
          activate-environment: "envmkatmsrffile"
          miniforge-variant: Mambaforge
          miniforge-version: latest
          use-mamba: true
          mamba-version: "*"
          channel-priority: strict
          auto-update-conda: true
          python-version: 3.11
      - 
        name: Install dependencies
        run: |
          echo $CONDA_PREFIX
          mamba install -y nco xarray numba numpy netcdf4
      - 
        name: Run tests
        working-directory: components/eam/tools/mkatmsrffile
        run: |
          echo $CONDA_PREFIX
          wget https://web.lcrc.anl.gov/public/e3sm/inputdata/atm/cam/chem/trop_mozart/dvel/clim_soilw.nc
          wget https://web.lcrc.anl.gov/public/e3sm/inputdata/atm/cam/chem/trop_mozart/dvel/regrid_vegetation.nc
          wget https://web.lcrc.anl.gov/public/e3sm/inputdata/atm/cam/chem/trop_mozart/dvel/map_1x1_to_ne30pg2_traave_c20240903.nc
          python mkatmsrffile.py --map_file=map_1x1_to_ne30pg2_traave_c20240903.nc --vegetation_file=regrid_vegetation.nc --soil_water_file=clim_soilw.nc --dst_grid=ne30pg2

  mkatmsrffile-notify:
    needs: mkatmsrffile-test
    if: ${{ failure() && needs.mkatmsrffile-test.outputs.event_name != 'pull_request' }}
    runs-on: ubuntu-latest
    steps:
      - name: Create issue
        run: |
          previous_issue_number=$(gh issue list \
          --label "$LABELS" \
          --json number \
          --jq '.[0].number')
          if [[ -n $previous_issue_number ]]; then
            gh issue comment "$previous_issue_number" \
              --body "$BODY"
          else
            gh issue create \
              --title "$TITLE" \
              --assignee "$ASSIGNEES" \
              --label "$LABELS" \
              --body "$BODY"
          fi
        env:
          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
          GH_REPO: ${{ github.repository }}
          TITLE: mkatmsrffile test failure
          ASSIGNEES: whannah1
          LABELS: bug,notify-mkatmsrffile-gh-action
          BODY: |
            Workflow failed! There's likely an issue in the mkatmsrffile tool! For more information, please see:
              - Workflow URL: https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }} (number ${{ github.run_number }}, attempt ${{ github.run_attempt }})
              - Workflow SHA: ${{ github.sha }}