From c268864c3919de4e40bb6941ee81cebecafb38ff Mon Sep 17 00:00:00 2001 From: Jasmin Frangenberg <73216762+jasmezz@users.noreply.github.com> Date: Fri, 9 Feb 2024 11:29:21 +0000 Subject: [PATCH] Apply suggestions from code review [skip ci] Co-authored-by: James A. Fellows Yates --- CHANGELOG.md | 2 +- conf/modules.config | 1 - 2 files changed, 1 insertion(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index b44270d8..ea1bcbae 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -9,7 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - [#322](https://github.com/nf-core/funcscan/pull/322) Updated all modules: introduce environment.yml files. (by @jasmezz) - [#324](https://github.com/nf-core/funcscan/pull/324) Removed separate DeepARG test profile because database download is now stable. (by @jasmezz) -- [#332](https://github.com/nf-core/funcscan/pull/332) & [#327](https://github.com/nf-core/funcscan/pull/327) Merged pipeline template of nf-core/tools version 2.12.1 (by @jfy133) +- [#332](https://github.com/nf-core/funcscan/pull/332) & [#327](https://github.com/nf-core/funcscan/pull/327) Merged pipeline template of nf-core/tools version 2.12.1 (by @jfy133, @jasmezz) ### `Fixed` diff --git a/conf/modules.config b/conf/modules.config index b2f3956a..d2d22273 100644 --- a/conf/modules.config +++ b/conf/modules.config @@ -202,7 +202,6 @@ process { } withName: DEEPARG_DOWNLOADDATA { - containerOptions = '-v $(which bash):/usr/local/lib/python2.7/site-packages/Theano-0.8.2-py2.7.egg-info/PKG-INFO' publishDir = [ path: { "${params.outdir}/databases/deeparg" }, mode: params.publish_dir_mode,