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process_robust04.py
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process_robust04.py
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import argparse
import ir_datasets
import os
import json
import glob
import tqdm
def read_result(path):
retrieval_results = {}
with open(path) as f:
for line in f:
qid, _, pid, _, score, _ = line.rstrip().split()
if qid not in retrieval_results:
retrieval_results[qid] = []
retrieval_results[qid].append((pid, float(score)))
with open(path) as f:
for line in f:
name = line.rstrip().split()[-1]
break
return retrieval_results, name
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument('--mode', type=str, required=True)
#
parser.add_argument('--query_output_path', type=str)
parser.add_argument('--collection_output_path', type=str)
#
parser.add_argument('--run_path', type=str)
#
parser.add_argument('--fold_one_path', type=str)
#
parser.add_argument('--fold_one_pattern', type=str)
args = parser.parse_args()
if args.mode == "download":
dataset = ir_datasets.load("disks45/nocr/trec-robust-2004")
q_w = open(args.query_output_path, "w")
for tuple in dataset.queries_iter():
qid = tuple[0]
title = tuple[1]
description = tuple[2]
q_w.write(f"{qid}\t{title}\n")
q_w.close()
# d_w = open(args.collection_output_path, "w")
dataset = ir_datasets.load("disks45/nocr/trec-robust-2004")
corpus = {}
for tuple in dataset.docs_iter():
docid = tuple[0]
title = tuple[1]
body = tuple[2]
marked_up_doc = tuple[3]
corpus[docid] = {}
# corpus[docid]["docid"] = docid
corpus[docid]["title"] = title
corpus[docid]["text"] = body
# d_w.write(f"{docid}\t{title}. {body}\n")
# d_w.close()
with open(args.collection_output_path, "w") as w:
w.write(json.dumps(corpus))
elif args.mode =="split_run":
args.dataset_name = args.run_path.split("/")[-1].split(".")[0]
retrieval_results, name = read_result(args.run_path)
for fold_id in [1, 2, 3, 4, 5]:
count = 0
run_path_ = args.run_path.replace(f"{args.dataset_name}.", f"{args.dataset_name}-fold{fold_id}.")
w = open(run_path_, "w")
dataset = ir_datasets.load(f"disks45/nocr/trec-robust-2004/fold{fold_id}")
for tuple in dataset.queries_iter():
qid = tuple[0]
count += 1
for idx, (docid, score) in enumerate(retrieval_results[qid]):
rank = idx + 1
w.write(f'{qid} Q0 {docid} {rank} {score} {name}\n')
print(fold_id, count)
w.close()
elif args.mode == "merge":
for fold_ids in [[2,3,4,5], [1,3,4,5], [1,2,4,5], [1,2,3,5], [1,2,3,4]]:
folds={}
for fold_id in fold_ids:
with open(args.fold_one_path.replace("-fold1",f"-fold{fold_id}"), 'r') as r:
fold = json.load(r)
folds.update(fold)
print(fold_ids,len(folds))
name = "".join(list(map(str,fold_ids)))
with open(args.fold_one_path.replace("-fold1",f"-fold{name}"), "w") as w:
w.write(json.dumps(folds))
folds={}
for fold_id in [1,2,3,4,5]:
with open(args.fold_one_path.replace("-fold1",f"-fold{fold_id}"), 'r') as r:
fold = json.load(r)
folds.update(fold)
print("all folds:", len(folds))
with open(args.fold_one_path.replace("-fold1",""), "w") as w:
w.write(json.dumps(folds))
elif args.mode == "merge_k":
fold_ids_inference = ["1", "2", "3", "4", "5"]
fold_ids_training = ["2345", "1345", "1245", "1235", "1234"]
for fold_one_path in tqdm.tqdm(sorted(glob.glob(args.fold_one_pattern))):
q2k = {}
# merging
for fold_id_inference, fold_id_training in zip(fold_ids_inference, fold_ids_training):
fold_one_path_ = fold_one_path.replace("-fold1", f"-fold{fold_id_inference}")
#print(fold_one_path_)
if "ckpt" in fold_one_path_:
fold_one_path_ = fold_one_path_.replace("ckpt-robust04-fold2345", f"ckpt-robust04-fold{fold_id_training}")
#print(fold_one_path_,"\n\n")
with open(fold_one_path_, 'r') as r:
for line in r:
qid, k = line.rstrip().split("\t")
q2k[qid] = int(k)
# write
assert len(q2k) == 238
fold_one_path_ = fold_one_path.replace("-fold1", "")
if "ckpt" in fold_one_path_:
fold_one_path_ = fold_one_path_.replace("ckpt-robust04-fold2345", "ckpt-robust04")
#print(fold_one_path_)
q2p_w = open(fold_one_path_, 'w')
for index, qid in enumerate(q2k.keys()):
q2p_w.write(qid + '\t' + str(q2k[qid]) + '\n')
q2p_w.close()