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Copyright updates

Copyright updates #6

Workflow file for this run

name: Ubuntu tests
on:
workflow_dispatch:
pull_request:
branches:
- '**'
push:
branches:
- main
jobs:
build-and-test:
if: ${{ !contains(github.event.pull_request.labels.*.name, 'ci:off') }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
include:
- os: "ubuntu-20.04"
codename: "focal"
cc: "gcc"
cxx: "g++"
- os: "ubuntu-22.04"
codename: "jammy"
cc: "gcc"
cxx: "g++"
- os: "ubuntu-22.04"
codename: "jammy"
cc: "icx"
cxx: "icpx"
env:
CHASTE_TEST_OUTPUT: ${{ github.workspace }}/chaste-test-dir
CHASTE_BUILD_DIR: ${{ github.workspace }}/Chaste/chaste-build-dir
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
steps:
- name: checkout Chaste
uses: actions/checkout@v4
with:
repository: 'Chaste/Chaste'
ref: 'develop'
path: 'Chaste'
- name: checkout this repo
uses: actions/checkout@v4
with:
path: 'Chaste/projects/OpenVT'
- name: install dependencies
run: |
echo 'deb [signed-by=/usr/share/keyrings/chaste.asc] https://chaste.github.io/ubuntu ${{ matrix.codename }}/' | sudo tee -a /etc/apt/sources.list.d/chaste.list
sudo wget -O /usr/share/keyrings/chaste.asc https://chaste.github.io/chaste.asc
sudo apt update
sudo apt install chaste-dependencies
- name: Downgrade libexpat1 (native ubuntu-22.04 only)
if: ${{ matrix.os == 'ubuntu-22.04' }}
run: |
if dpkg -l | grep libexpat1-dev | grep 2.4.7-1ubuntu0.3; then
sudo apt-get install -y --allow-downgrades libexpat1=2.4.7-1 libexpat1-dev=2.4.7-1
fi
- name: install and set up Intel LLVM compiler
run: |
echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
sudo apt update
sudo apt install intel-oneapi-compiler-dpcpp-cpp
source /opt/intel/oneapi/setvars.sh
printenv >> $GITHUB_ENV
if: ${{ matrix.cc == 'icx' }}
- name: compiler version
run: |
${CXX} --version
- name: make build and test directories
run: |
mkdir -p ${CHASTE_BUILD_DIR}
mkdir -p ${CHASTE_TEST_OUTPUT}
- name: cmake configure
run: cmake -DCMAKE_BUILD_TYPE=Release ..
working-directory: ${{ env.CHASTE_BUILD_DIR }}
- name: build project
run: cmake --build . --parallel 4 --target project_OpenVT
working-directory: ${{ env.CHASTE_BUILD_DIR }}
- name: run project tests
run: ctest -j4 -L project_OpenVT --output-on-failure
working-directory: ${{ env.CHASTE_BUILD_DIR }}