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Define ROBOT templates for cell surface markers #1

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Caroline-99 opened this issue Oct 4, 2024 · 0 comments
Open

Define ROBOT templates for cell surface markers #1

Caroline-99 opened this issue Oct 4, 2024 · 0 comments

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@Caroline-99
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Caroline-99 commented Oct 4, 2024

image

https://www.perplexity.ai/search/the-following-are-asserted-to-IjilDlgxRKGcNILcm862jg

Aim

(:Cell_type { label: 'alveolar macrophage})-[:has_plasma_membrane_part { confidence: [9], reference: ["DOI:1234./986"]})
->(:protein { id: "uniprot:P12345")-[:has_species*]-?(:species { label: "Mus musculus"; curie: "NCBItaxon:12345"})
  • relationship TBD

Draft robot template (TBC)

cell_type relationship marker reliability score references
CL id has_plasma_membrane_part UniProt ID . .
CL id has_high_plasma_membrane_part UniProt ID . .
CL id has_low_plasma_membrane_part UniProt ID . .
CL id lacks_plasma_membrane_part UniProt ID . .
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