From 0615c46a172568dcfc18b5ee39042a5e25ef78ec Mon Sep 17 00:00:00 2001 From: ugur Date: Wed, 16 Oct 2024 13:26:52 +0100 Subject: [PATCH 1/3] Add Curated_data_KG_Mo_Group - KG.csv --- .../Curated_data_KG_Mo_Group - KG.csv | 715 ++++++++++++++++++ 1 file changed, 715 insertions(+) create mode 100644 anndata2rdf/src/curated_data/Curated_data_KG_Mo_Group - KG.csv diff --git a/anndata2rdf/src/curated_data/Curated_data_KG_Mo_Group - KG.csv b/anndata2rdf/src/curated_data/Curated_data_KG_Mo_Group - KG.csv new file mode 100644 index 0000000..a72234e --- /dev/null +++ b/anndata2rdf/src/curated_data/Curated_data_KG_Mo_Group - KG.csv @@ -0,0 +1,715 @@ +Dataset (indv datasets within larger group),Full name dataset (top of page),CxG Link,h5ad link,Reference_DOI,Bionetworks reference,Standard category present? (T/F),Standard category cell_type present? (T/F),Author Category Cell Type Field Name,Content,Value type(s),Notes,Study Short Name,CxG Dataset Collection X,Is the dataset Normal or Normal/Diseased,Stage +Single Cell Sequencing of Human PBMCs in Clonal Hematopoeisis of Indeterminant Potential,Multiomic Profiling of Human Clonal Hematopoiesis Reveals Genotype and Cell-Specific Inflammatory Pathway Activation,https://cellxgene.cziscience.com/e/19e46756-9100-4e01-8b0e-23b557558a4c.cxg/,https://datasets.cellxgene.cziscience.com/4e6932db-5a78-40e4-b961-f87f66ba139a.h5ad,doi:10.1182/bloodadvances.2023011445,,T,T,scType_celltype,Cell types,"Normal, abbreviations ",,Heimlich et al. (2024) Blood Advances,https://cellxgene.cziscience.com/collections/0aab20b3-c30c-4606-bd2e-d20dae739c45,Normal,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,celltype.final ,Cell types ,"Normal, abbreviations",,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,celltype.broad_clustering_annot,Cell types ,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGH.clonotype,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGK.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGK.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGK.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGK.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGK.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGL.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGL.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGL.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGL.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,BCR_IGL.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,Day,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,DayFactor,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRA.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRA.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRA.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRA.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRA.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRab_TRB.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRD.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRD.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRD.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRD.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRG.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRG.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRG.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,TCRgd_TRG.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,age_group,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,cv19_vax_boost_or_HC_status,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,library_prep_batch,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"Circulating Immune cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/242c6e7f-9016-4048-af70-d631f5eea188.cxg/,https://datasets.cellxgene.cziscience.com/ec22af38-8cea-45ee-9911-c54f16d8cfcd.h5ad,doi:10.1016/j.isci.2023.108572,,T,T,sampleName_with_day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.broad_clustering_annot,Cell types ,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.final,Cell types ,"Normal, abbreviations",,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,Day,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,DayFactor,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.V.1TRD.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,age_group,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,cv19_vax_boost_or_HC_status,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,library_prep_batch,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/bc260987-8ee5-4b6e-8773-72805166b3f7.cxg/,https://datasets.cellxgene.cziscience.com/d410890b-4646-4976-abde-1dec006cd76a.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,sampleName_with_day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.broad_clustering_annot,Cell types ,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.final,Cell types ,"Normal, abbreviations",,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,Day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,DayFactor,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,age_group,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,cv19_vax_boost_or_HC_status,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,library_prep_batch,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"M cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a434263-2aa5-4fd9-a1f3-1c4a2a8fb771.cxg/,https://datasets.cellxgene.cziscience.com/e969ceb9-197c-42d5-bf81-e19e5a6e32ac.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,sampleName_with_day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.broad_clustering_annot,Cell types ,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.final,Cell types ,"Normal, abbreviations",,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,Day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,DayFactor,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.CDR3.1A.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.J.1TRA.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.V.1TRA.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRD.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,age_group,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,cv19_vax_boost_or_HC_status,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,library_prep_batch,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"innate T cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/693ae928-96ba-47de-b9d9-1321c675bfcd.cxg/,https://datasets.cellxgene.cziscience.com/deaa7dd9-bee9-4007-86fa-de384c539ea7.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,sampleName_with_day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,celltype.final,Cell types ,"Normal, abbreviations ",,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGH.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGK.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,BCR_IGL.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,Day,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,DayFactor,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab.top10,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRA.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.D.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRab_TRB.clonotype.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.C.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.CDR3.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.J.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,TCRgd_TRG.V.1,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,age_group,Other,Normal,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,cv19_vax_boost_or_HC_status,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,library_prep_batch,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +"B cells -- CV19 infection, vaccination and HC",COVID-19 mRNA vaccine elicits a potent adaptive immune response in the absence of persistent inflammation observed in SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/1a7e99fe-d5b6-44d7-aa50-c6ef6ab29761.cxg/,https://datasets.cellxgene.cziscience.com/60b76da3-5490-4b61-a73f-38dc7b586465.h5ad,doi:10.1016/j.isci.2023.108573,,T,T,sampleName_with_day,Other,Abbreviations ,,Ivanova et al. (2023) iScience,https://cellxgene.cziscience.com/collections/ecb739c5-fe0d-4b48-81c6-217c4d64eec4,Normal ,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,author_cell_type,Cell types ,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f2,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,ct_cov,Cell types ,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f3,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,Processing_Cohort,Other,Normal,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f4,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,cell_state,Other,"Normal, Abbreviations",,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f5,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,disease_state,Other,"Normal, Abbreviations",,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f6,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,ind_cov,Other,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f7,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,library_uuid,Other,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f8,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,sample_uuid,Other,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f9,Diseased,Adult +multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples,Single-cell RNA-seq reveals the cell-type-specific molecular and genetic associations to lupus,https://cellxgene.cziscience.com/e/218acb0f-9f2f-4f76-b90b-15a4b7c7f629.cxg/,https://datasets.cellxgene.cziscience.com/8f2e4a29-e397-4f33-bc9a-3181e06b64b0.h5ad,doi:10.1126/science.abf1970,,T,T,suspension_uuid,Other,Abbreviations ,,Perez et al. (2022) Science,https://cellxgene.cziscience.com/collections/436154da-bcf1-4130-9c8b-120ff9a888f10,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,cell_type_original,Cell types ,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,minor_subset,Cell types ,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,major_subset,Cell types ,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,cluster,Cell types ,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Age,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,BMI,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Death28,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,GEX_region,Other,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Institute,Other,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Outcome,Other,"Normal, abbreviations ",," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingDiabetes,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingHeartDisease,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingHypertension,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingImmunocompromised,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingKidneyDisease,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,PreExistingLungDisease,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Requiredvasoactive,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,SARSCoV2PCR,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Smoking,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,Source,Other,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,cell_type_source,Other,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,cluster_source,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,major_subset_source,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,minor_subset_source,Other,Normal,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +"COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs",A blood atlas of COVID-19 defines hallmarks of disease severity and specificity,https://cellxgene.cziscience.com/e/ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3.cxg/,https://datasets.cellxgene.cziscience.com/e72d0170-3399-4aa0-8c56-da7b4f0ced6b.h5ad,doi:10.1016/j.cell.2022.01.012,,T,T,scRNASeq_sample_ID,Other,Abbreviations ,," +Ahern et al. (2022) Cell",https://cellxgene.cziscience.com/collections/8f126edf-5405-4731-8374-b5ce11f53e82,Diseased,Adult +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Age_group,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da7,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,BMI,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da8,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,COVID_severity,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da9,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,COVID_status,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da10,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Ethnicity,Other,Abbreviations ,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da11,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Group,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da12,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Smoker,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da13,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,annotation_broad,Cell types ,Abbreviations ,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da14,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,annotation_detailed,Cell types ,Abbreviations ,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da15,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,annotation_detailed_fullNames,Cell types ,"Normal, abbreviations",,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da16,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,sample_id,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da17,Diseased,Both +PBMC,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/2a498ace-872a-4935-984b-1afa70fd9886.cxg/,https://datasets.cellxgene.cziscience.com/d911082e-b5e2-40e6-8f08-fb53c7894622.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,sequencing_library,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,COVID_severity,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,COVID_status,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Cell_type_annotation_level1,Cell types ,"Normal, abbreviations",,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Cell_type_annotation_level2,Other,"Normal, abbreviations",,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Cell_type_annotation_level3,Other,"Normal, abbreviations",,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Ethnicity_inferred,Other,Abbreviations ,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,First_symptoms_collection_interval,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,First_symptoms_hospitalisation_interval,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Group,Other,"Normal, abbreviations",,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Kit_version,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Positive_test_collection_interval,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,Smoker,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,batch,Other,Normal,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,dataset,Other,Abbreviations ,,Yoshida et al. (2022) Nature,https://cellxgene.cziscience.com/collections/03f821b4-87be-4ff4-b65a-b5fc00061da18,Diseased,Both +Airway,Local and systemic responses to SARS-CoV-2 infection in children and adults,https://cellxgene.cziscience.com/e/edc8d3fe-153c-4e3d-8be0-2108d30f8d70.cxg/,https://datasets.cellxgene.cziscience.com/69be948c-03f4-46e8-896e-530c79080808.h5ad,doi:10.1038/s41586-021-04345-x,,T,T,sample_id,Other,Normal,,Yoshida et al. 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Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,COVID_severity,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,COVID_severity_merged,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,COVID_status,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,D0_to_death,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,Lymphocyte_count,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,Monocyte_count,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,NIH_clinical,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,NIH_ordinal,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,WBC_count1,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,WBC_count2,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,WBC_count3,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,admission_level,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,batch,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,cell_group,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,consent,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,ct1,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,ct2,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,ct3,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,death,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,donor_age,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,exclude_restricted,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,freemux_cluster,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,leiden,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,non_pulmonary_infection,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,onset_to_D0_days,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,original_leiden,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,poo,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,pool_clust,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,pool_well,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,pulmonary_infection,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,race,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,respiratory_support,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,respiratory_support_D0,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,timepoint,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19,https://cellxgene.cziscience.com/e/01ad3cd7-3929-4654-84c0-6db05bd5fd59.cxg/,https://datasets.cellxgene.cziscience.com/02a1eee1-e290-47d1-8d9d-bc7f51c13670.h5ad,doi:10.1126/scitranslmed.abh2624,,T,T,well,Other,Normal,," +van der Wijst et al. (2021) Sci. Transl. Med.",https://cellxgene.cziscience.com/collections/7d7cabfd-1d1f-40af-96b7-26a0825a306d,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,author_cell_type,Cell types ,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,initial_clustering,Cell types ,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Collection_Day,Other,Abbreviations ,,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Days_from_onset,Other,Normal,,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Outcome,Other,Normal,,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Resample,Other,Normal,,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Site,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Smoker,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Status,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Status_on_day_collection,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Status_on_day_collection_summary,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Swab_result,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,Worst_Clinical_Status,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,sample_id,Other,Normal,,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Single-cell multi-omics analysis of the immune response in COVID-19,Single-cell multi-omics analysis of the immune response in COVID-19,https://cellxgene.cziscience.com/e/c7775e88-49bf-4ba2-a03b-93f00447c958.cxg/,,doi:10.1038/s41591-021-01329-2,,T,T,time_after_LPS,Other,"Normal, Abbreviated",,Stephenson et al. (2021) Nat Med,https://cellxgene.cziscience.com/collections/ddfad306-714d-4cc0-9985-d9072820c530,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,author_cell_type,Cell types ,"Normal, Abbreviated",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,days_since_hospitalized,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,days_since_onset,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,dsm_severity_score_group,Other,"Normal, Abbreviated",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,ever_admitted_to_icu,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,outcome,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,severity,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19,https://cellxgene.cziscience.com/e/21d3e683-80a4-4d9b-bc89-ebb2df513dde.cxg/,https://datasets.cellxgene.cziscience.com/6d14e6f5-9b9f-4e8e-8b31-cee9020e18a5.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,timepoint,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,author_cell_type,Cell types ,"Normal, Abbreviated",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,days_since_hospitalized,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,days_since_onset,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,dsm_severity_score_group,Other,"Normal, Abbreviated",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,ever_admitted_to_icu,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,outcome,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,severity,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells,Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-20,https://cellxgene.cziscience.com/e/30cd5311-6c09-46c9-94f1-71fe4b91813c.cxg/,https://datasets.cellxgene.cziscience.com/504b4b53-f0fb-43a6-8b8d-6254e8d81e85.h5ad,doi:10.1016/j.cell.2021.02.018,,T,T,timepoint,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,celltype,Cell types,Abbreviations,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,majorType,Cell types,Abbreviations,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,BCR single cell sequencing,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,COVID-19-related medication and anti-microbialstion,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,City,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,CoVID-19 severity ,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Comorbidities,Other,"Normal, abbreviations",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Leukocytes [G over L] ,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Lymphocytes [G over L] ,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Neutrophils [G over L] ,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Outcome,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Sample time,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Sample type,Other,"Normal, abbreviations",,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Sampling day (Days after symptom onset),Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,TCR single cell sequencing,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,Unpublished,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients,COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas,https://cellxgene.cziscience.com/e/9dbab10c-118d-496b-966a-67f1763a6b7d.cxg/,https://datasets.cellxgene.cziscience.com/ae18e694-6f45-4635-affa-63ac0e29323d.h5ad,doi:10.1016/j.cell.2021.01.053,,T,T,sampleID,Other,Normal,,Liu et al. (2021) Cell,https://cellxgene.cziscience.com/collections/ed9185e3-5b82-40c7-9824-b2141590c7f0,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,Annotation,Cell types,"Normal, abbreviations",," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,age,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,cardiacevent_72,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,cluster,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,fever_symptoms,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,gastrointestinal_symptoms,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_diabetes,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_heartdisease,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_hypertension,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_immunocompromised,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_kidneydisease,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,preexisting_lungdisease,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,rank,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,respiratory_symptoms,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,time_point,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,who_d0,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,who_d28,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,who_d3,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,who_d7,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +PBMCs,Acute COVID-19 cohort across a range of WHO categories seen at the Department of Emergency Medicine at MGH,https://cellxgene.cziscience.com/e/fa8605cf-f27e-44af-ac2a-476bee4410d3.cxg/,https://datasets.cellxgene.cziscience.com/6c779b98-f437-4cbf-9b81-a3e6be637419.h5ad,doi:10.1101/2020.11.20.20227355,,T,T,who_max,Other,Normal ,," +Chan Zuckerberg Initiative Single-Cell COVID-19 Consortia et al. (2020) medRxiv",https://cellxgene.cziscience.com/collections/0434a9d4-85fd-4554-b8e3-cf6c582bb2fa,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,cell.type.fine,Cell types,"Normal, abbreviations",,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,cell.type.coarse,Cell types,"Normal, abbreviations",,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,singler,Cell types,"Normal, abbreviations",,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,Admission,Other,"Normal, abbreviations",,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,Ventilated ,Other,"Normal, abbreviations",,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,Single-cell atlas of peripheral immune response to SARS-CoV-2 infection,https://cellxgene.cziscience.com/e/456e8b9b-f872-488b-871d-94534090a865.cxg/,https://datasets.cellxgene.cziscience.com/9fd987e8-bf5f-42a1-ba2e-20d0b7b36228.h5ad,,,T,T,seurat_clusters,Other,Normal,,Wilk et al. (2020) Nat Med,https://cellxgene.cziscience.com/collections/a72afd53-ab92-4511-88da-252fb0e26b9a,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Celltype,Cell types,"Normal, abbreviations",,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Chest X-ray ,Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Comorbidity,Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Consciousness,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Disease groupe ,Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Heart rate (BPM),Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Hospital day,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Lymphocyte per microL (%),Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Monocyte prt microL (%),Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,NEWS scores,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Neutrophil per microL (%),Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,O2 saturation,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,O2 supplement,Other,"Normal, abbreviations",,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Respiratory rate (BPM) ,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Sample ID,Other,"Normal, abbreviations",,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Severity,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Systolic BP,Other,Normal ,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Temperature,Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,Treatment,Other,"Normal, abbreviations",,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19,https://cellxgene.cziscience.com/e/de2c780c-1747-40bd-9ccf-9588ec186cee.cxg/,https://datasets.cellxgene.cziscience.com/5f4efede-b295-4be4-aded-eb8b9a946382.h5ad,,,T,T,WBC per microL,Other,Normal,,Lee et al. (2020) Sci. Immunol.,https://cellxgene.cziscience.com/collections/4f889ffc-d4bc-4748-905b-8eb9db47a2ed,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,cell_type_fine,Cell types ,"Normal, abbreviations",,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,cell_type_intermediate,Cell types ,"Normal, abbreviations",,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,cell_type_main,Cell types ,"Normal, abbreviations",,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,initial_clustering,Other,Normal,,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,interval_death_symptoms_onset_days,Other,Normal,,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,intubation_days,Other,Normal,,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,pmi_h,Other,Normal,,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,recorded_ethnicity,Other,"Normal, abbreviations",,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,recorded_racee,Other,"Normal, abbreviations",,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +A molecular single-cell lung atlas of lethal COVID-19,A molecular single-cell lung atlas of lethal COVID-19,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,https://datasets.cellxgene.cziscience.com/5d338c19-dae4-49e9-88e4-86c76c78a340.h5ad,,,T,T,biosample_id,Other,Abbreviations,,Melms et al. (2021) Nature,https://cellxgene.cziscience.com/e/d8da613f-e681-4c69-b463-e94f5e66847f.cxg/,Diseased,Adult +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Main_cluster_names,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Matched_BCA_cell_name,Cell types ,Abbreviations,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Matched_MCA_cell_name,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Organ_cell_lineage,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,sub_cluster_name,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,RT_group,Other,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,batch,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,sample,Other,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,BCA_cluster_info,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Batch,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development,A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/f7c1c579-2dc0-47e2-ba19-8165c5a0e353.cxg/,https://datasets.cellxgene.cziscience.com/5b8941a9-fef8-4348-876c-c333a87c0c3f.h5ad,,,T,T,Experiment_batch,Other,Abbreviations,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Fetal +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Main_cluster_names,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Matched_BCA_cell_name,Cell types ,Abbreviations,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Matched_MCA_cell_name,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Organ_cell_lineage,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,sub_cluster_name,Cell types ,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,RT_group,Other,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,batch,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,sample,Other,"Normal, abbreviations",," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,BCA_cluster_info,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Batch,Other,Normal,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Survey of human embryonic development (1 million cells subset),A human cell atlas of fetal gene expression,https://cellxgene.cziscience.com/e/fa27492b-82ff-4ab7-ac61-0e2b184eee67.cxg/,https://datasets.cellxgene.cziscience.com/35476cf7-35f1-4daf-8507-734403d09c27.h5ad,,,T,T,Experiment_batch,Other,Abbreviations,," +Cao et al. (2020) Science",https://cellxgene.cziscience.com/collections/c114c20f-1ef4-49a5-9c2e-d965787fb90c,Normal,Adult +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,cell_name,Cell types ,"Normal, abbreviations",," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,cell_name_detailed,Cell types ,"Normal, abbreviations",," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,cell_type_group,Cell types ,"Normal, abbreviations",," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,CRL,Other,Normal,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,Donor_nb,Other,Normal,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,Enrichment_fraction,Other,Abbreviations,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,PCW,Other,Normal,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,Purification,Other,Abbreviations,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Fetal Human Gut (6-11 PCW),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/b46237d1-19c6-4af2-9335-9854634bad16.cxg/,https://datasets.cellxgene.cziscience.com/f416c89e-0b92-4ab2-99f0-385b5a5dc4c0.h5ad,,,T,T,Sample,Other,Normal,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Fetal +Paediatric Human Gut (4-14y),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/8e47ed12-c658-4252-b126-381df8d52a3d.cxg/,https://datasets.cellxgene.cziscience.com/518edb4f-1e86-4af3-99e4-0a599a94e9fe.h5ad,,,T,T,annotation_V2,Cell types ,"Normal, abbreviations",," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Paediatric +Paediatric Human Gut (4-14y),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/8e47ed12-c658-4252-b126-381df8d52a3d.cxg/,https://datasets.cellxgene.cziscience.com/518edb4f-1e86-4af3-99e4-0a599a94e9fe.h5ad,,,T,T,batch,Other,Normal,," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Paediatric +Paediatric Human Gut (4-14y),Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease,https://cellxgene.cziscience.com/e/8e47ed12-c658-4252-b126-381df8d52a3d.cxg/,https://datasets.cellxgene.cziscience.com/518edb4f-1e86-4af3-99e4-0a599a94e9fe.h5ad,,,T,T,inferred state,Other,"Normal, abbreviations",," +Elmentaite et al. (2020) Developmental Cell",https://cellxgene.cziscience.com/collections/17481d16-ee44-49e5-bcf0-28c0780d8c4a,Both,Paediatric +Ileum,Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy,https://cellxgene.cziscience.com/e/36c867a7-be10-4e69-9b39-5de12b0af6da.cxg/,https://datasets.cellxgene.cziscience.com/7afb64af-cd3b-44ed-bd2a-3d7bd8a98e13.h5ad,,,T,T,author_cell_type1,Cell types ,"Normal, abbreviations",,Martin et al. (2019) Cell,https://cellxgene.cziscience.com/collections/2b02dff7-e427-4cdc-96fb-c0f354c099aa,Diseased,Adult +Ileum,Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy,https://cellxgene.cziscience.com/e/36c867a7-be10-4e69-9b39-5de12b0af6da.cxg/,https://datasets.cellxgene.cziscience.com/7afb64af-cd3b-44ed-bd2a-3d7bd8a98e13.h5ad,,,T,T,author_cell_type2,Cell types ,"Normal, abbreviations",,Martin et al. (2019) Cell,https://cellxgene.cziscience.com/collections/2b02dff7-e427-4cdc-96fb-c0f354c099aa,Diseased,Adult +Ileum,Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy,https://cellxgene.cziscience.com/e/36c867a7-be10-4e69-9b39-5de12b0af6da.cxg/,https://datasets.cellxgene.cziscience.com/7afb64af-cd3b-44ed-bd2a-3d7bd8a98e13.h5ad,,,T,T,author_cell_type_broad,Cell types ,"Normal, abbreviations",,Martin et al. (2019) Cell,https://cellxgene.cziscience.com/collections/2b02dff7-e427-4cdc-96fb-c0f354c099aa,Diseased,Adult +Ileum,Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy,https://cellxgene.cziscience.com/e/36c867a7-be10-4e69-9b39-5de12b0af6da.cxg/,https://datasets.cellxgene.cziscience.com/7afb64af-cd3b-44ed-bd2a-3d7bd8a98e13.h5ad,,,T,T,author_cell_type_stroma,Cell types ,"Normal, abbreviations",,Martin et al. (2019) Cell,https://cellxgene.cziscience.com/collections/2b02dff7-e427-4cdc-96fb-c0f354c099aa,Diseased,Adult +Ileum,Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy,https://cellxgene.cziscience.com/e/36c867a7-be10-4e69-9b39-5de12b0af6da.cxg/,https://datasets.cellxgene.cziscience.com/7afb64af-cd3b-44ed-bd2a-3d7bd8a98e13.h5ad,,,T,T,sample_id,Other,Normal,,Martin et al. (2019) Cell,https://cellxgene.cziscience.com/collections/2b02dff7-e427-4cdc-96fb-c0f354c099aa,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,Lane,Other,Normal,,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,MY_CCP_Status,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,MY_RF_status,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,MY_crp,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,activity_python_binary_crp,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,activity_python_binary_esr,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,activity_python_crp,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,activity_python_esr,Other,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,batch,Other,Normal,,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,fine_annot,Cell types ,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,leiden_r3.0,Other,Normal,,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,phase,Other,Abbreviations,,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,rough_annot,Cell types ,"Normal, abbreviations",,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity,https://cellxgene.cziscience.com/e/d18736c3-6292-4379-919a-d6d973204c87.cxg/,https://datasets.cellxgene.cziscience.com/ac9c13da-7134-4d09-8086-d0933cbdba41.h5ad,,,T,T,scrub_doublets,Cell types ,Normal,,Binvignat et al. (2024) JCI Insight,https://cellxgene.cziscience.com/collections/e1a9ca56-f2ee-435d-980a-4f49ab7a952b,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,Cell.Types,Cell types ,Abbreviations,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,Age,Other,Normal,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,Amyloid,Other,"Normal, abbreviations",,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,Braak,Other,Normal,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,PMI,Other,Normal,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,RIN,Other,Normal,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,SORT,Other,Abbreviations,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory,Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,https://datasets.cellxgene.cziscience.com/45b78a7b-6def-40f2-b27f-8eab7848602f.h5ad,,,T,T,Sample.ID,Other,Abbreviations,,Otero-Garcia et al. (2022) Neuron,https://cellxgene.cziscience.com/e/85c60876-7f35-40c5-a256-7808d84c6ba5.cxg/,Diseased,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,cluster_layers,Cell types ,"Normal, abbreviations",,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,duration,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,sample,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,age_death,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,age_onset,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/98f5d518-1e60-4307-b732-ab045cd3cbc2.cxg/,https://datasets.cellxgene.cziscience.com/2ed5317e-5cdd-40c9-9570-6601c386a705.h5ad,,,T,T,chip,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,cluster,Cell types ,"Normal, abbreviations",," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,duration,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,sample,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,age_death,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,age_onset,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +"Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains","Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/0bc7235a-ae5a-479d-a487-510435377e55.cxg/,https://datasets.cellxgene.cziscience.com/9e66dffa-7407-41b5-98b9-43f2753f171e.h5ad,,,T,T,chip,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,cluster_layers,Cell types ,"Normal, abbreviations",,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,duration,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,sample,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,age_death,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,age_onset,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Frontal cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/3b8b5de4-3aa1-4ac6-8890-8d03c8219981.cxg/,https://datasets.cellxgene.cziscience.com/e4369a29-b892-40db-9894-75a2a790f575.h5ad,,,T,T,chip,Other,Normal,,Gittings et al. (2023) Acta Neuropathol,https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Cell types ,"Normal, abbreviations",," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Occipital cortex samples from C9-FTD and age matched control brains,"Cortical brain samples from C9-ALS, C9-ALS/FTD, C9-FTD patients and age matched controls",https://cellxgene.cziscience.com/e/e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f.cxg/,https://datasets.cellxgene.cziscience.com/d46da49f-9463-4d94-8157-44d449962f9d.h5ad,,,T,T,cluster,Other,Normal,," +Gittings et al. (2023) Acta Neuropathol",https://cellxgene.cziscience.com/collections/aee9c366-f2fb-470b-8937-577d5d87d3fc,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,subclass.l1,Cell types ,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,subclass.l2,Cell types ,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,Age_binned,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,class,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,diabetes_history,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,disease_category,Other,"Normal, abbreviations",,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,eGFR,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,experiment_id,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,hypertension,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,library_id,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,percent.cortex,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,percent.medulla,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,region,Other,"Normal, abbreviations",,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/a12ccb9b-4fbe-457d-8590-ac78053259ef.cxg/,https://datasets.cellxgene.cziscience.com/7d8af09a-2f96-49f9-a473-f561a332f25d.h5ad,,,T,T,specimen,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,subclass.l1,Cell types ,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,author_cell_type,Cell types ,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,clusterClass,Cell types ,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,Age_binned,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,LibraryID,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,Race,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,Run,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,SampleID,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,SpecimenID,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,clusterNumber,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,dataSource,Other,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,diabetes_history,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,disease_category,Other,"Normal, abbreviations",,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,diseasetype,Other,"Normal, abbreviations",,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,eGFR,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,hypertension,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,orig.ident,Other,Normal,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +Single-cell RNA-seq of the Adult Human Kidney (Version 1.5),An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5),https://cellxgene.cziscience.com/e/dea717d4-7bc0-4e46-950f-fd7e1cc8df7d.cxg/,https://datasets.cellxgene.cziscience.com/f5b6d620-76df-45c5-9524-e5631be0e44a.h5ad,,,T,T,sampletype,Other,Abbreviations,,KPMP,https://cellxgene.cziscience.com/collections/0f528c8a-a25c-4840-8fa3-d156fa11086f,Both,Adult +DCM/ACM heart cell atlas: All cells,Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies,https://datasets.cellxgene.cziscience.com/a4279399-5621-46bb-ac2c-aba78ae683aa.h5ad,https://datasets.cellxgene.cziscience.com/a4279399-5621-46bb-ac2c-aba78ae683aa.h5ad,,,T,T,cell_states,Cell types ,Abbreviations,,Reichart et al. (2022) Science,https://cellxgene.cziscience.com/collections/e75342a8-0f3b-4ec5-8ee1-245a23e0f7cb,Diseased,Adult +All-snRNA-Spatial multi-omic map of human myocardial infarction,Spatial multi-omic map of human myocardial infarction,https://cellxgene.cziscience.com/e/1c739a3e-c3f5-49d5-98e0-73975e751201.cxg/,https://datasets.cellxgene.cziscience.com/171ed79a-b829-4efb-98bf-14951e8a4c90.h5ad,,,T,T,cell_type_original ,Cell types ,"Normal, abbreviations",,Kuppe et al. (2022) Nature,https://cellxgene.cziscience.com/collections/8191c283-0816-424b-9b61-c3e1d6258a77,Diseased,Adult +All-snATAC-Spatial multi-omic map of human myocardial infarctio,Spatial multi-omic map of human myocardial infarction,https://cellxgene.cziscience.com/e/72a69193-d84a-42f6-98a3-d7ef0ec0c381.cxg/,https://datasets.cellxgene.cziscience.com/c834dd56-af8d-4f48-a420-6e2144ec7336.h5ad,,,T,T,cell_type_original ,Cell types ,"Normal, abbreviations",,Kuppe et al. (2022) Nature,https://cellxgene.cziscience.com/collections/8191c283-0816-424b-9b61-c3e1d6258a77,Diseased,Adult +snRNA-seq data for human cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/bab7432a-5cfe-45ea-928c-422d03c45cdd.cxg/,https://datasets.cellxgene.cziscience.com/b23a3e02-d6f9-43a3-bb1b-38af6860c092.h5ad,,,T,T,precisest_label,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for human cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/bab7432a-5cfe-45ea-928c-422d03c45cdd.cxg/,https://datasets.cellxgene.cziscience.com/b23a3e02-d6f9-43a3-bb1b-38af6860c092.h5ad,,,T,T,author_cell_type,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for human cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/bab7432a-5cfe-45ea-928c-422d03c45cdd.cxg/,https://datasets.cellxgene.cziscience.com/b23a3e02-d6f9-43a3-bb1b-38af6860c092.h5ad,,,T,T,subtype,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for human cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/bab7432a-5cfe-45ea-928c-422d03c45cdd.cxg/,https://datasets.cellxgene.cziscience.com/b23a3e02-d6f9-43a3-bb1b-38af6860c092.h5ad,,,T,T,broad lineage ,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for mouse cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/72eb2332-b308-4014-8d25-95233a9aff1e.cxg/,https://datasets.cellxgene.cziscience.com/18fb432a-be41-4677-9396-e1680a0852bf.h5ad,,,T,T,precisest_label,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for mouse cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/72eb2332-b308-4014-8d25-95233a9aff1e.cxg/,https://datasets.cellxgene.cziscience.com/18fb432a-be41-4677-9396-e1680a0852bf.h5ad,,,T,T,author_cell_type,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for mouse cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/72eb2332-b308-4014-8d25-95233a9aff1e.cxg/,https://datasets.cellxgene.cziscience.com/18fb432a-be41-4677-9396-e1680a0852bf.h5ad,,,T,T,subtype,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +snRNA-seq data for mouse cerebella from 9-12 developmental stages,Cellular development and evolution of the mammalian cerebellum,https://cellxgene.cziscience.com/e/72eb2332-b308-4014-8d25-95233a9aff1e.cxg/,https://datasets.cellxgene.cziscience.com/18fb432a-be41-4677-9396-e1680a0852bf.h5ad,,,T,T,broad lineage ,Cell types ,"Normal, abbreviations",,Sepp et al. (2023) Nature,https://cellxgene.cziscience.com/collections/72d37bc9-76cc-442d-9131-da0e273862db,Normal,Adult +Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes,Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes,https://cellxgene.cziscience.com/e/37b21763-7f0f-41ae-9001-60bad6e2841d.cxg/,https://datasets.cellxgene.cziscience.com/f89a618b-fe4b-404e-bd39-7c574529b1f5.h5ad,,,T,T,cell_label,Cell types ,"Normal, abbreviations",,Fasolino et al. (2022) Nat Metab,https://cellxgene.cziscience.com/collections/51544e44-293b-4c2b-8c26-560678423380,Both,Adult +Human kidney cortex snATAC-seq data from donors with and without diabetic kidney disease,Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression,https://cellxgene.cziscience.com/e/ad0bf220-dd49-4b71-bb5c-576fee675d2b.cxg/,https://datasets.cellxgene.cziscience.com/242417b1-0e72-47b4-b145-f497cf7413ae.h5ad,,,T,T,author_cell_type,Cell types ,Abbreviations,,Wilson et al. (2022) Nat Commun,https://cellxgene.cziscience.com/collections/b3e2c6e3-9b05-4da9-8f42-da38a664b45b,Both,Adult +Human kidney cortex snRNA-seq data from donors with and without diabetic kidney disease,Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression,https://cellxgene.cziscience.com/e/e067e5ca-e53e-485f-aa8e-efd5435229c8.cxg/,https://datasets.cellxgene.cziscience.com/01bc7039-961f-4c24-b407-d535a2a7ba2c.h5ad,,,T,T,author_cell_type,Cell types ,Abbreviations,,Wilson et al. (2022) Nat Commun,https://cellxgene.cziscience.com/collections/b3e2c6e3-9b05-4da9-8f42-da38a664b45b,Both,Adult +All cells types from snRNA-seq of human primary sclerosing cholangitis patients and healthy controls,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,https://cellxgene.cziscience.com/e/1873a18a-66fd-4a4d-8277-a872c93f5b59.cxg/,https://datasets.cellxgene.cziscience.com/303e954f-33d7-473e-86f9-f96a18192bd2.h5ad,,,T,T,author_cell_type,Cell types ,"Normal, abbreviations",,Andrews et al. (2024) Journal of Hepatology,https://cellxgene.cziscience.com/collections/0c8a364b-97b5-4cc8-a593-23c38c6f0ac5,Both,Adult +All cells types from scRNA-seq of human primary sclerosing cholangitis patients and healthy controls,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,https://cellxgene.cziscience.com/e/02792605-4760-4023-82ad-40fc4458a5db.cxg/,https://datasets.cellxgene.cziscience.com/b09dac61-836f-418a-ad0a-064d2bc5343d.h5ad,,,T,T,author_cell_type,Cell types ,"Normal, abbreviations",,Andrews et al. (2024) Journal of Hepatology,https://cellxgene.cziscience.com/collections/0c8a364b-97b5-4cc8-a593-23c38c6f0ac5,Both,Adult +snRNA-seq of human anterior and posterior hippocampus,Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans,https://cellxgene.cziscience.com/e/94c41723-b2c4-4b59-a49a-64c9b851903e.cxg/,https://datasets.cellxgene.cziscience.com/36141ff7-ec4f-44cc-8bf3-ed9d9675d89a.h5ad,,,T,T,author_cell_type,Cell types ,"Normal, abbreviations",,Ayhan et al. (2021) Neuron,https://cellxgene.cziscience.com/collections/f17b9205-f61f-4a0f-a65a-73ba91c50ade,Normal,Adult +Whole Taxonomy - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD),SEA-AD: Seattle Alzheimer’s Disease Brain Cell Atlas,https://cellxgene.cziscience.com/e/c2876b1b-06d8-4d96-a56b-5304f815b99a.cxg/,https://datasets.cellxgene.cziscience.com/dbb111e5-d67f-48b1-8a95-0afd1280fab5.h5ad,,,T,T,Supertype,Cell types ,"Normal, abbreviations",," +Gabitto et al. (2023) bioRxiv",https://cellxgene.cziscience.com/collections/1ca90a2d-2943-483d-b678-b809bf464c30,Diseased,Adult +Whole Taxonomy - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD),SEA-AD: Seattle Alzheimer’s Disease Brain Cell Atlas,https://cellxgene.cziscience.com/e/c2876b1b-06d8-4d96-a56b-5304f815b99a.cxg/,https://datasets.cellxgene.cziscience.com/dbb111e5-d67f-48b1-8a95-0afd1280fab5.h5ad,,,T,T,Subclass,Cell types ,"Normal, abbreviations",," +Gabitto et al. (2023) bioRxiv",https://cellxgene.cziscience.com/collections/1ca90a2d-2943-483d-b678-b809bf464c30,Diseased,Adult +Whole Taxonomy - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD,SEA-AD: Seattle Alzheimer’s Disease Brain Cell Atlas,https://cellxgene.cziscience.com/e/6f7fd0f1-a2ed-4ff1-80d3-33dde731cbc3.cxg/,https://datasets.cellxgene.cziscience.com/3c75e9e9-b09a-4805-bcdd-4ecde45b98f8.h5ad,,,T,T,Supertype,Cell types ,"Normal, abbreviations",," +Gabitto et al. (2023) bioRxiv",https://cellxgene.cziscience.com/collections/1ca90a2d-2943-483d-b678-b809bf464c30,Diseased,Adult +Whole Taxonomy - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD,SEA-AD: Seattle Alzheimer’s Disease Brain Cell Atlas,https://cellxgene.cziscience.com/e/6f7fd0f1-a2ed-4ff1-80d3-33dde731cbc3.cxg/,https://datasets.cellxgene.cziscience.com/3c75e9e9-b09a-4805-bcdd-4ecde45b98f8.h5ad,,,T,T,Subclass,Cell types ,"Normal, abbreviations",," +Gabitto et al. (2023) bioRxiv",https://cellxgene.cziscience.com/collections/1ca90a2d-2943-483d-b678-b809bf464c30,Diseased,Adult +Human dermal fibroblast atlas,Human and mouse dermal fibroblast atlas,https://cellxgene.cziscience.com/e/a19d1667-a7b5-4556-9e5f-f9bfa690c0f1.cxg/,https://datasets.cellxgene.cziscience.com/74817596-5770-438e-9f01-fae245e025e3.h5ad,,,T,T,,,,," +Alex Martínez Ascensión",https://cellxgene.cziscience.com/collections/3c4f0970-7614-43de-beb7-6128b3cb74ed,Normal,Adult +Mouse dermal fibroblast atlas,Human and mouse dermal fibroblast atlas,https://cellxgene.cziscience.com/e/b2dd6bc9-36ed-4cd4-a2b3-51f6a2386afa.cxg/, https://datasets.cellxgene.cziscience.com/175c7cff-bcc3-409e-81e6-6157eed5ef0b.h5ad,,,T,T,,,,," +Alex Martínez Ascensión",https://cellxgene.cziscience.com/collections/3c4f0970-7614-43de-beb7-6128b3cb74ed,Normal,Adult +Placenta Infection,Acute response to pathogens in the early human placenta at single-cell resolution,https://cellxgene.cziscience.com/e/3966ba97-beb8-4d0b-9954-d3775cd2cd61.cxg/,https://datasets.cellxgene.cziscience.com/50bbe1a2-5f27-47f5-a809-046459a4ae5e.h5ad,,,T,T,celltype_annotation,Cell types ,Abbreviations,,Hoo et al. (2024) Cell Systems,https://cellxgene.cziscience.com/e/3966ba97-beb8-4d0b-9954-d3775cd2cd61.cxg/,Diseased,"Adult, Fetal" +All Cells - snRNA-seq,Cross-dementia human brain snRNA-seq (Rexach et al 2024),https://cellxgene.cziscience.com/e/ac0c6561-7a48-4185-af6f-af799f699172.cxg/,https://datasets.cellxgene.cziscience.com/2808a16d-64c5-451b-91a5-c1a2d9f270d5.h5ad,,,T,T,ct_subcluster,Cell types ,Abbreviations,,Rexach et al. (2024) Cell,https://cellxgene.cziscience.com/e/ac0c6561-7a48-4185-af6f-af799f699172.cxg/,Diseased,Adult +COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/96a3f64b-0ee9-40d8-91e9-813ce38261c9.cxg/,https://datasets.cellxgene.cziscience.com/d92fa234-9288-4acb-9d66-bf13a9a65b94.h5ad,,,T,T,Cell.class,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/96a3f64b-0ee9-40d8-91e9-813ce38261c9.cxg/,https://datasets.cellxgene.cziscience.com/d92fa234-9288-4acb-9d66-bf13a9a65b94.h5ad,,,T,T,Cell.group,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +T Cell and NK Cell Subtypes of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/bc2a7b3d-f04e-477e-96c9-9d5367d5425c.cxg/,https://datasets.cellxgene.cziscience.com/5668bd32-5e84-4708-b976-af6a902ed9a4.h5ad,,,T,T,Cell.class,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +T Cell and NK Cell Subtypes of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/bc2a7b3d-f04e-477e-96c9-9d5367d5425c.cxg/,https://datasets.cellxgene.cziscience.com/5668bd32-5e84-4708-b976-af6a902ed9a4.h5ad,,,T,T,Cell.group,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +Classical Monocyte sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/db0752b9-f20e-40b8-8997-992f3ae0bb2e.cxg/,https://datasets.cellxgene.cziscience.com/24c44ebe-c9c8-403b-9b55-6c8e4b46c69e.h5ad,,,T,T,sub_cluster,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +B Cell/Plasmablast Sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/d9b4bc69-ed90-4f5f-99b2-61b0681ba436.cxg/,https://datasets.cellxgene.cziscience.com/16acb1d0-4108-4767-9615-0b42abe09992.h5ad,,,T,T,Cell.class,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +B Cell/Plasmablast Sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/d9b4bc69-ed90-4f5f-99b2-61b0681ba436.cxg/,https://datasets.cellxgene.cziscience.com/16acb1d0-4108-4767-9615-0b42abe09992.h5ad,,,T,T,Cell.group,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +Platelet sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets,A Web Portal and Workbench for Biological Dissection of Single Cell COVID-19 Host Responses,https://cellxgene.cziscience.com/e/e763ed0d-0e5a-4b8e-9514-6da3d9e47956.cxg/,https://datasets.cellxgene.cziscience.com/8651e63c-0f98-4a87-bdbd-2da41bdf6de5.h5ad,,,T,T,sub_cluster,Cell types ,"Normal, abbreviations",,Jin et al. (2021) iScience,https://cellxgene.cziscience.com/collections/b9fc3d70-5a72-4479-a046-c2cc1ab19efc,Diseased,Adult +Human Oligodendrocytes 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/5829c7ba-697f-418e-8b98-d605b192dc48.cxg/,https://datasets.cellxgene.cziscience.com/f697d6db-798b-41b4-95fc-15c739367a4d.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Nurr-Negative Nuclei 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/dea1aa78-c0a2-413f-b375-f91cce49e4d0.cxg/,https://datasets.cellxgene.cziscience.com/56b8657c-ee0d-48e8-b9cb-8d69fe71f1bd.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Non-DA Neurons 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/251b1a7e-d050-4486-8d50-4c2619eb0f46.cxg/,https://datasets.cellxgene.cziscience.com/29bc336a-b0f8-49d1-8cd8-d2cd878680f8.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Nurr-Positive Nuclei 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/92161459-9103-4379-ae34-73a38eee1d1d.cxg/,https://datasets.cellxgene.cziscience.com/234f6d22-65df-4d90-9b4d-b631c7099013.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Astrocytes 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/07760522-707a-4a1c-8891-dbd1226d6b27.cxg/,https://datasets.cellxgene.cziscience.com/744afc03-e10b-4908-9baa-096995a01cf2.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Human Microglia 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/f8d8b443-bca6-4c3c-9042-669dfb7f8030.cxg/,https://datasets.cellxgene.cziscience.com/662c884d-add3-494d-b325-c13bc9f0b6ae.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human DA Neurons 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/2856d06c-0ff9-4e01-bfc9-202b74d0b60f.cxg/,https://datasets.cellxgene.cziscience.com/83c08c97-52c4-4045-b9ad-4eeeb4a3d606.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human Endothelial cells 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/f5be4b96-f5a3-4c3d-84ac-6f69daf744d5.cxg/,https://datasets.cellxgene.cziscience.com/2d6a777f-8b44-4164-b141-fd9c1776346a.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult +Human OPC Cells 10x scRNA-seq,Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease,https://cellxgene.cziscience.com/e/4dd1cd23-fc4d-4fd1-9709-602540f3ca6f.cxg/,https://datasets.cellxgene.cziscience.com/f5369070-f44c-46b2-b058-5762c9a561d8.h5ad,,,T,F,author_cell_type,Cell types ,Abbreviations,,Kamath et al. (2022) Nat Neurosci,https://cellxgene.cziscience.com/collections/b0f0b447-ac37-45b0-b1bf-5c0b7d871120,Diseased,Adult \ No newline at end of file From 4184e3e9e7a09dc723b6bc99f7c3874157274e07 Mon Sep 17 00:00:00 2001 From: ugur Date: Wed, 16 Oct 2024 13:27:42 +0100 Subject: [PATCH 2/3] Add `merge=True` to generate_rdf_graph --- anndata2rdf/src/generate_rdf.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/anndata2rdf/src/generate_rdf.py b/anndata2rdf/src/generate_rdf.py index 19089d6..178132f 100644 --- a/anndata2rdf/src/generate_rdf.py +++ b/anndata2rdf/src/generate_rdf.py @@ -19,7 +19,7 @@ def generate_rdf_graph( aea = AnndataEnrichmentAnalyzer(anndata_file_path, author_cell_type_list) aea.analyzer_manager.co_annotation_report() gg = GraphGenerator(aea) - gg.generate_rdf_graph() + gg.generate_rdf_graph(merge=True) gg.set_label_adding_priority(author_cell_type_list) gg.add_label_to_terms() metadata_field_list = [ From 7909ad4cf158523e167a870c8e629035bbfcd6cd Mon Sep 17 00:00:00 2001 From: ugur Date: Wed, 16 Oct 2024 13:27:56 +0100 Subject: [PATCH 3/3] Add new ontologies to vfb_fullontologies.txt --- cl_kb_pipeline/config/collectdata/vfb_fullontologies.txt | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/cl_kb_pipeline/config/collectdata/vfb_fullontologies.txt b/cl_kb_pipeline/config/collectdata/vfb_fullontologies.txt index d651504..d56ad26 100644 --- a/cl_kb_pipeline/config/collectdata/vfb_fullontologies.txt +++ b/cl_kb_pipeline/config/collectdata/vfb_fullontologies.txt @@ -1,6 +1,12 @@ http://purl.obolibrary.org/obo/cl/cl-base.owl https://purl.obolibrary.org/obo/go/go-base.owl http://purl.obolibrary.org/obo/uberon/uberon-base.owl +http://purl.obolibrary.org/obo/hancestro/hancestro.owl +http://purl.obolibrary.org/obo/mondo/mondo-simple.owl +http://purl.obolibrary.org/obo/pato.owl +http://purl.obolibrary.org/obo/mmusdv.owl +http://purl.obolibrary.org/obo/hsapdv.owl +https://raw.githubusercontent.com/kharchenkolab/cap_ontology/main/capo-base.owl https://raw.githubusercontent.com/Cellular-Semantics/lung_demo/refs/heads/main/8bcc7ef5-f08e-49fc-824f-ced6d951138a.owl https://raw.githubusercontent.com/Cellular-Semantics/lung_demo/refs/heads/main/b53b3bcd-3485-4562-a543-e473dfef3b27.owl https://raw.githubusercontent.com/Cellular-Semantics/CellMark/refs/heads/main/clm-kg.owl