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31 Open 20 Closed
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Issues list

add MOobject design diagram to README documentation Improvements or additions to documentation reneeTools RepoName
#70 opened Oct 23, 2024 by kelly-sovacool
built-in function to retrieve metadata, genes, etc as one dataframe reneeTools RepoName
#69 opened Oct 23, 2024 by kelly-sovacool
support different types of normalized counts reneeTools RepoName
#68 opened Oct 23, 2024 by kelly-sovacool
discuss project name reneeTools RepoName
#67 opened Oct 23, 2024 by kelly-sovacool 2024-10
@kelly-sovacool @phoman14
1
use custom cpm function instead of edger reneeTools RepoName
#65 opened Sep 12, 2024 by kelly-sovacool
@kelly-sovacool
allow users to specify multiple gene column names on dataset creation reneeTools RepoName
#64 opened Sep 12, 2024 by kelly-sovacool
@kelly-sovacool
change count thresholds to be fractions instead of integers reneeTools RepoName
#63 opened Aug 20, 2024 by kelly-sovacool
4
Clean Filter.R NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#62 opened Aug 19, 2024 by sync-by-unito bot 2024-09
@kelly-sovacool
1
default color set within dataset enhancement New feature or request NIDAP sync with the NIDAP team's Trello board plots reneeTools RepoName
#60 opened Aug 16, 2024 by kelly-sovacool
MVP vignette documentation Improvements or additions to documentation mvp minimum viable product [ iteration 2 ] reneeTools RepoName
#56 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Clean Raw Counts enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#55 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - DEG Gene List enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#54 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Venn Diagram enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#53 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Volcano Enhanced enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#52 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Volcano Summary enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#51 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - DEG enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#50 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - 3DPCA enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#49 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Heatmap enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#48 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Normalization enhancement New feature or request mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board reneeTools RepoName
#46 opened Jul 9, 2024 by kelly-sovacool
4 tasks
reconcile gh-actions with NIDAP team ci continuous integration poc proof of concept [ iteration 1 ] reneeTools RepoName
#45 opened Jul 9, 2024 by kelly-sovacool
@kelly-sovacool
handle gene_id and GeneName columns from RENEE enhancement New feature or request reneeTools RepoName
#44 opened Jul 9, 2024 by kelly-sovacool
Proof of concept: Rmd notebook w/ filter_counts enhancement New feature or request poc proof of concept [ iteration 1 ] reneeTools RepoName
#42 opened Jul 9, 2024 by kelly-sovacool
gene co-expression network inference enhancement New feature or request reneeTools RepoName
#25 opened Feb 27, 2024 by kelly-sovacool
batch effect correction enhancement New feature or request
#19 opened Dec 29, 2023 by kelly-sovacool
differential expression with limma-voom enhancement New feature or request
#18 opened Dec 29, 2023 by kelly-sovacool
@kelly-sovacool
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