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add MOobject design diagram to README
documentation
Improvements or additions to documentation
reneeTools
RepoName
#70
opened Oct 23, 2024 by
kelly-sovacool
built-in function to retrieve metadata, genes, etc as one dataframe
reneeTools
RepoName
#69
opened Oct 23, 2024 by
kelly-sovacool
support different types of normalized counts
reneeTools
RepoName
#68
opened Oct 23, 2024 by
kelly-sovacool
use custom cpm function instead of edger
reneeTools
RepoName
#65
opened Sep 12, 2024 by
kelly-sovacool
allow users to specify multiple gene column names on dataset creation
reneeTools
RepoName
#64
opened Sep 12, 2024 by
kelly-sovacool
change count thresholds to be fractions instead of integers
reneeTools
RepoName
#63
opened Aug 20, 2024 by
kelly-sovacool
default color set within dataset
enhancement
New feature or request
NIDAP
sync with the NIDAP team's Trello board
plots
reneeTools
RepoName
#60
opened Aug 16, 2024 by
kelly-sovacool
MVP vignette
documentation
Improvements or additions to documentation
mvp
minimum viable product [ iteration 2 ]
reneeTools
RepoName
#56
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Clean Raw Counts
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#55
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - DEG Gene List
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#54
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Venn Diagram
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#53
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Volcano Enhanced
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#52
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Volcano Summary
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#51
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - DEG
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#50
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - 3DPCA
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#49
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Heatmap
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#48
opened Jul 9, 2024 by
kelly-sovacool
Add NIDAP template - Normalization
enhancement
New feature or request
mvp
minimum viable product [ iteration 2 ]
NIDAP
sync with the NIDAP team's Trello board
reneeTools
RepoName
#46
opened Jul 9, 2024 by
kelly-sovacool
4 tasks
reconcile gh-actions with NIDAP team
ci
continuous integration
poc
proof of concept [ iteration 1 ]
reneeTools
RepoName
#45
opened Jul 9, 2024 by
kelly-sovacool
handle New feature or request
reneeTools
RepoName
gene_id
and GeneName
columns from RENEE
enhancement
#44
opened Jul 9, 2024 by
kelly-sovacool
Proof of concept: Rmd notebook w/ filter_counts
enhancement
New feature or request
poc
proof of concept [ iteration 1 ]
reneeTools
RepoName
#42
opened Jul 9, 2024 by
kelly-sovacool
gene co-expression network inference
enhancement
New feature or request
reneeTools
RepoName
#25
opened Feb 27, 2024 by
kelly-sovacool
batch effect correction
enhancement
New feature or request
#19
opened Dec 29, 2023 by
kelly-sovacool
differential expression with limma-voom
enhancement
New feature or request
#18
opened Dec 29, 2023 by
kelly-sovacool
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