From a770a2c4162db49b6d26a428e851d9d48827c48b Mon Sep 17 00:00:00 2001
From: Kelly Sovacool <kelly.sovacool@nih.gov>
Date: Wed, 22 Nov 2023 08:25:29 -0500
Subject: [PATCH] fix: add when condition

---
 modules/CCBR/custom/convertsicer/main.nf | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/modules/CCBR/custom/convertsicer/main.nf b/modules/CCBR/custom/convertsicer/main.nf
index 44f220d..04ab155 100644
--- a/modules/CCBR/custom/convertsicer/main.nf
+++ b/modules/CCBR/custom/convertsicer/main.nf
@@ -15,6 +15,9 @@ process CONVERT_SICER {
         tuple val(meta), path("${sicer_peaks.baseName}.converted.bed"),        emit: bed
         tuple val(meta), path("${sicer_peaks.baseName}.converted.broadPeak"),  emit: peak, optional: true
 
+    when:
+        task.ext.when == null || task.ext.when
+
     script:
     $/
     #!/usr/bin/env python