diff --git a/CHANGELOG.md b/CHANGELOG.md index 78b882663..dc991e655 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -28,7 +28,6 @@ - Spike sorting: - Add SpikeSorting V1 pipeline. #651 - Move modules into spikesorting.v0 #807 - - Add MUA analysis to spike sorting pipeline - LFP: - Minor fixes to LFPBandV1 populator and `make`. #706, #795 - LFPV1: Fix error for multiple lfp settings on same data #775 @@ -41,7 +40,7 @@ - DLC path handling from config, and normalize naming convention. #722 - Fix in place column bug #752 - Decoding: - - Add `decoding` pipeline V1. #731, #769 + - Add `decoding` pipeline V1. #731, #769, #819 - Add a table to store the decoding results #731 - Use the new `non_local_detector` package for decoding #731 - Allow multiple spike waveform features for clusterless decoding #731 @@ -51,6 +50,10 @@ - Rename SortedSpikesGroup.SortGroup to SortedSpikesGroup.Units #807 - Change methods with load\_... to fetch\_... for consistency #807 - Use merge table methods to access part methods #807 +- MUA + - Add MUA pipeline V1. #731, #819 +- Ripple + - Add figurl to Ripple pipeline #819 ## [0.4.3] (November 7, 2023) diff --git a/README.md b/README.md index c627581ff..2241868e1 100644 --- a/README.md +++ b/README.md @@ -10,6 +10,8 @@ visualization, and sharing of neuroscience data to support reproducible research. It is designed to be interoperable with the NWB format and integrates open-source tools into a coherent framework. +Try out a demo [here](https://spyglass.hhmi.2i2c.cloud/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FLorenFrankLab%2Fspyglass-demo&urlpath=lab%2Ftree%2Fspyglass-demo%2Fnotebooks%2F01_Insert_Data.ipynb&branch=main)! + Features of Spyglass include: - **Standardized data storage** - Spyglass uses the open-source @@ -86,3 +88,5 @@ a data analysis framework for reproducible and shareable neuroscience research. [10.1101/2024.01.25.577295](https://doi.org/10.1101/2024.01.25.577295 ). *\* Equal contribution* + +See paper related code [here](https://github.com/LorenFrankLab/spyglass-paper). diff --git a/notebooks/43_Decoding_SortedSpikes.ipynb b/notebooks/43_Decoding_SortedSpikes.ipynb index dc0cc9b61..23e1888fe 100644 --- a/notebooks/43_Decoding_SortedSpikes.ipynb +++ b/notebooks/43_Decoding_SortedSpikes.ipynb @@ -655,7 +655,7 @@ ], "source": [ "# look at the sorting within the group we just made\n", - "SortedSpikesGroup.SortGroup & {\n", + "SortedSpikesGroup.Units & {\n", " \"nwb_file_name\": nwb_copy_file_name,\n", " \"sorted_spikes_group_name\": \"test_group\",\n", " \"unit_filter_params_name\": unit_filter_params_name,\n", diff --git a/notebooks/51_MUA_Detection.ipynb b/notebooks/51_MUA_Detection.ipynb index e8e51f66d..5d7f9a061 100644 --- a/notebooks/51_MUA_Detection.ipynb +++ b/notebooks/51_MUA_Detection.ipynb @@ -4,23 +4,25 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "[2024-02-07 14:44:16,324][INFO]: Connecting edeno@lmf-db.cin.ucsf.edu:3306\n", + "[2024-02-07 14:44:16,357][INFO]: Connected edeno@lmf-db.cin.ucsf.edu:3306\n" + ] + } + ], "source": [ - "from pathlib import Path\n", "import datajoint as dj\n", + "from pathlib import Path\n", "\n", "dj.config.load(\n", " Path(\"../dj_local_conf.json\").absolute()\n", - ") # load config for database connection info" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# MUA Analysis and Detection\n", + ") # load config for database connection info\n", "\n", - "NOTE: This notebook is a work in progress. It is not yet complete and may contain errors." + "from spyglass.mua.v1.mua import MuaEventsV1, MuaEventsParameters" ] }, { @@ -28,38 +30,27 @@ "execution_count": 2, "metadata": {}, "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "[2024-01-29 13:51:25,319][INFO]: Connecting root@localhost:3306\n", - "[2024-01-29 13:51:25,405][INFO]: Connected root@localhost:3306\n", - "[13:51:26][WARNING] Spyglass: Please update position_tools to >= 0.1.0\n" - ] - }, { "data": { "text/html": [ "\n", " \n", " \n", " \n", - " \n", + " \n", "
\n",
- " sorting_id \n", - " \n", - " | \n",
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- " sorter \n", - " \n", - " | \n",
- " sorter_param_name \n", - " \n", - " | \n",
- " nwb_file_name \n", - " name of the NWB file\n", - " | \n",
- " interval_list_name \n", - " descriptive name of this interval list\n", + "mua_param_name \n", + " a name for this set of parameters\n", " | \n",
- " curation_id \n", - " \n", + "mua_param_dict \n", + " dictionary of parameters\n", " |
---|---|---|---|---|---|---|---|
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default | \n", + "=BLOB= |
...
\n", - "Total: 23
\n", + " \n", + "Total: 1
\n", " " ], "text/plain": [ - "*sorting_id *merge_id recording_id sorter sorter_param_n nwb_file_name interval_list_ curation_id \n", - "+------------+ +------------+ +------------+ +------------+ +------------+ +------------+ +------------+ +------------+\n", - "08a302b6-5505- 485a4ddf-332d- 449b64e3-db0b- clusterless_th default_cluste mediumnwb20230 45f6b9a1-eef3- 0 \n", - "0ca508ee-af4c- 6acb99b8-6a0c- 328da21c-1d9c- clusterless_th default_cluste mediumnwb20230 686d9951-1c0f- 0 \n", - "209dc048-6fae- f7237e18-4e73- aff78f2f-2ba0- clusterless_th default_cluste mediumnwb20230 719e8a86-fcf1- 0 \n", - "21a9a593-f6f3- 7e3fa66e-727e- 2402805a-04f9- clusterless_th default_cluste mediumnwb20230 d581b117-160e- 0 \n", - "406a20e3-5a9f- 6d039a63-17ad- f1427e00-2974- clusterless_th default_cluste mediumnwb20230 0e848c38-9105- 0 \n", - "4131c51b-c56d- e0e9133a-7a4e- 9e332d82-1daf- clusterless_th default_cluste mediumnwb20230 9ed11db5-c42e- 0 \n", - "4c5a629a-71d9- 9959b614-2318- 3a2c3eed-413a- clusterless_th default_cluste mediumnwb20230 2b9fbf14-74a0- 0 \n", - "4d629c07-1931- c0eb6455-fc41- f07bc0b0-de6b- clusterless_th default_cluste mediumnwb20230 5c68f0f0-f577- 0 \n", - "554a9a3c-0461- 912e250e-56d8- 7f128981-6868- clusterless_th default_cluste mediumnwb20230 f4b9301f-bc91- 0 \n", - "7bb007f2-26d3- d7d2c97a-0e6e- a9b7cec0-1256- clusterless_th default_cluste mediumnwb20230 74270cba-36ee- 0 \n", - "80e1f37f-48a7- abb92dce-4410- 3c40ebdc-0b61- clusterless_th default_cluste mediumnwb20230 0f91197e-bebb- 0 \n", - "8848c4a8-a2f2- 74e10781-1228- 257c077b-8f3b- clusterless_th default_cluste mediumnwb20230 e289e03d-32ad- 0 \n", - " ...\n", - " (Total: 23)" + "*mua_param_nam mua_param_\n", + "+------------+ +--------+\n", + "default =BLOB= \n", + " (Total: 1)" ] }, "execution_count": 2, @@ -235,71 +113,13 @@ } ], "source": [ - "from spyglass.spikesorting.spikesorting_merge import SpikeSortingOutput\n", - "import spyglass.spikesorting.v1 as sgs\n", - "\n", - "\n", - "nwb_copy_file_name = \"mediumnwb20230802_.nwb\"\n", - "\n", - "sorter_keys = {\n", - " \"nwb_file_name\": nwb_copy_file_name,\n", - " \"sorter\": \"clusterless_thresholder\",\n", - " \"sorter_param_name\": \"default_clusterless\",\n", - "}\n", - "\n", - "(sgs.SpikeSortingSelection & sorter_keys) * SpikeSortingOutput.CurationV1" + "MuaEventsParameters()" ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "array([UUID('485a4ddf-332d-35b5-3ad4-0561736c1844'),\n", - " UUID('6acb99b8-6a0c-eb83-1141-5f603c5895e0'),\n", - " UUID('f7237e18-4e73-4aee-805b-90735e9147de'),\n", - " UUID('7e3fa66e-727e-1541-819a-b01309bb30ae'),\n", - " UUID('6d039a63-17ad-0b78-4b1e-f02d5f3dbbc5'),\n", - " UUID('e0e9133a-7a4e-1321-a43a-e8afcb2f25da'),\n", - " UUID('9959b614-2318-f597-6651-a3a82124d28a'),\n", - " UUID('c0eb6455-fc41-c200-b62e-e3ca81b9a3f7'),\n", - " UUID('912e250e-56d8-ee33-4525-c844d810971b'),\n", - " UUID('d7d2c97a-0e6e-d1b8-735c-d55dc66a30e1'),\n", - " UUID('abb92dce-4410-8f17-a501-a4104bda0dcf'),\n", - " UUID('74e10781-1228-4075-0870-af224024ffdc'),\n", - " UUID('8bbddc0f-d6ae-6260-9400-f884a6e25ae8'),\n", - " UUID('614d796c-0b95-6364-aaa0-b6cb1e7bbb83'),\n", - " UUID('b332482b-e430-169d-8ac0-0a73ce968ed7'),\n", - " UUID('86897349-ff68-ac72-02eb-739dd88936e6'),\n", - " UUID('4a712103-c223-864f-82e0-6c23de79cc14'),\n", - " UUID('cf858380-e8a3-49de-c2a9-1a277e307a68'),\n", - " UUID('cc4ee561-f974-f8e5-0ea4-83185263ac67'),\n", - " UUID('4a72c253-b3ca-8c13-e615-736a7ebff35c'),\n", - " UUID('b92a94d8-ee1e-2097-a81f-5c1e1556ed24'),\n", - " UUID('5c53bd33-d57c-fbba-e0fb-55e0bcb85d03'),\n", - " UUID('0751a1e1-a406-7f87-ae6f-ce4ffc60621c')], dtype=object)" - ] - }, - "execution_count": 3, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "spikesorting_merge_ids = (\n", - " (sgs.SpikeSortingSelection & sorter_keys) * SpikeSortingOutput.CurationV1\n", - ").fetch(\"merge_id\")\n", - "\n", - "spikesorting_merge_ids" - ] - }, - { - "cell_type": "code", - "execution_count": 4, - "metadata": {}, "outputs": [ { "data": { @@ -307,23 +127,21 @@ "\n", " \n", " \n", - " \n", - " \n", - " \n",
- " merge_id \n", - " \n", - " | \n",
- " spikesorting_merge_id \n", - " \n", - " | \n",
- " unit_group_name \n", - " Name of unit group\n", - " |
---|---|---|
39b22078-84fa-d3aa-8ca9-2368603d6a47 | \n", - "0751a1e1-a406-7f87-ae6f-ce4ffc60621c | \n", - "all units |
7bc69ef8-ae89-f30f-c236-56a87a49ed63 | \n", - "485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "all units |
2f6295c6-ad14-dde0-6b14-ee29bc2ed849 | \n", - "4a712103-c223-864f-82e0-6c23de79cc14 | \n", - "all units |
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9658d944-1f1f-d467-1f56-bcc32d63e6e8 | \n", - "614d796c-0b95-6364-aaa0-b6cb1e7bbb83 | \n", - "all units |
76cb7574-a687-37c9-1045-8e4e5d13a0b0 | \n", - "6acb99b8-6a0c-eb83-1141-5f603c5895e0 | \n", - "all units |
87af74fa-a77e-f29b-99f7-f5720aa4816f | \n", - "6d039a63-17ad-0b78-4b1e-f02d5f3dbbc5 | \n", - "all units |
3cccfce5-dad9-61c5-7eee-1c7081837100 | \n", - "74e10781-1228-4075-0870-af224024ffdc | \n", - "all units |
bbddf25f-d810-f586-e3b8-cb96350fbbde | \n", - "7e3fa66e-727e-1541-819a-b01309bb30ae | \n", - "all units |
7887e5db-da1d-d261-d58a-a51757593965 | \n", - "86897349-ff68-ac72-02eb-739dd88936e6 | \n", - "all units |
1b7ba376-89f9-e0ac-9104-fbd1bd984e41 | \n", - "8bbddc0f-d6ae-6260-9400-f884a6e25ae8 | \n", - "all units |
...
\n", - "Total: 23
\n",
- " mua_param_name \n", - " a name for this set of parameters\n", - " | \n",
- " mua_param_dict \n", - " dictionary of parameters\n", - " |
---|---|
default | \n", - "=BLOB= |
Total: 1
\n",
- " mua_param_name \n", - " a name for this set of parameters\n", - " | \n",
- " nwb_file_name \n", - " name of the NWB file\n", - " | \n",
- " sorted_spikes_group_name \n", - " \n", - " | \n",
- " pos_merge_id \n", - " \n", - " | \n",
- " artifact_interval_list_name \n", - " descriptive name of this interval list\n", - " | \n",
- " analysis_file_name \n", - " name of the file\n", - " | \n",
- " mua_times_object_id \n", - " \n", - " |
---|---|---|---|---|---|---|
default | \n", - "mediumnwb20230802_.nwb | \n", - "test_group | \n", - "6dfae23d-6034-e483-06e7-28ab4c29282f | \n", - "test_artifact_times | \n", - "mediumnwb20230802_0ADLJ3W6MJ.nwb | \n", - "56d076f9-8751-4cec-b7b4-21a14058fcff |
Total: 1
\n", - " | start_time | \n", - "end_time | \n", - "duration | \n", - "mean_zscore | \n", - "median_zscore | \n", - "max_zscore | \n", - "min_zscore | \n", - "speed_at_start | \n", - "speed_at_end | \n", - "max_speed | \n", - "min_speed | \n", - "median_speed | \n", - "mean_speed | \n", - "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
id | \n", - "\n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " | \n", - " |
0 | \n", - "1.625936e+09 | \n", - "1.625936e+09 | \n", - "0.084000 | \n", - "1.250994 | \n", - "1.225517 | \n", - "2.346275 | \n", - "0.026900 | \n", - "2.845775 | \n", - "1.442441 | \n", - "2.845775 | \n", - "1.352343 | \n", - "1.978832 | \n", - "2.010321 | \n", - "
1 | \n", - "1.625936e+09 | \n", - "1.625936e+09 | \n", - "0.068000 | \n", - "1.867170 | \n", - "1.994518 | \n", - "3.243124 | \n", - "0.061468 | \n", - "0.287511 | \n", - "0.116674 | \n", - "0.287511 | \n", - "0.116674 | \n", - "0.184148 | \n", - "0.190783 | \n", - "
2 | \n", - "1.625936e+09 | \n", - "1.625936e+09 | \n", - "0.128000 | \n", - "1.308437 | \n", - "1.048030 | \n", - "3.013205 | \n", - "0.022677 | \n", - "2.097526 | \n", - "1.261806 | \n", - "2.131399 | \n", - "1.261806 | \n", - "1.945054 | \n", - "1.848956 | \n", - "
3 | \n", - "1.625936e+09 | \n", - "1.625936e+09 | \n", - "0.260000 | \n", - "1.847013 | \n", - "2.225766 | \n", - "2.979140 | \n", - "0.028124 | \n", - "0.793993 | \n", - "0.523751 | \n", - "2.196469 | \n", - "0.523751 | \n", - "1.697052 | \n", - "1.616889 | \n", - "
4 | \n", - "1.625936e+09 | \n", - "1.625936e+09 | \n", - "0.092000 | \n", - "1.320218 | \n", - "1.367887 | \n", - "2.377142 | \n", - "0.021857 | \n", - "2.139993 | \n", - "1.304687 | \n", - "2.139993 | \n", - "1.142313 | \n", - "1.321552 | \n", - "1.465801 | \n", - "
... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "... | \n", - "
212 | \n", - "1.625937e+09 | \n", - "1.625937e+09 | \n", - "0.228000 | \n", - "5.020090 | \n", - "4.976216 | \n", - "10.539919 | \n", - "0.239889 | \n", - "1.336351 | \n", - "0.441290 | \n", - "1.336351 | \n", - "0.389653 | \n", - "0.828371 | \n", - "0.804487 | \n", - "
213 | \n", - "1.625937e+09 | \n", - "1.625937e+09 | \n", - "0.303999 | \n", - "4.870160 | \n", - "4.968471 | \n", - "8.561497 | \n", - "0.129386 | \n", - "0.956787 | \n", - "0.408402 | \n", - "0.966132 | \n", - "0.170895 | \n", - "0.416961 | \n", - "0.540956 | \n", - "
214 | \n", - "1.625937e+09 | \n", - "1.625937e+09 | \n", - "0.140000 | \n", - "3.250498 | \n", - "3.146104 | \n", - "6.157476 | \n", - "0.122835 | \n", - "1.745086 | \n", - "2.199006 | \n", - "2.262194 | \n", - "1.745086 | \n", - "2.202081 | \n", - "2.125525 | \n", - "
215 | \n", - "1.625937e+09 | \n", - "1.625937e+09 | \n", - "0.060000 | \n", - "2.129116 | \n", - "2.216616 | \n", - "3.790466 | \n", - "0.127067 | \n", - "1.332429 | \n", - "1.077809 | \n", - "1.332429 | \n", - "1.077809 | \n", - "1.265536 | \n", - "1.242683 | \n", - "
216 | \n", - "1.625937e+09 | \n", - "1.625937e+09 | \n", - "0.104000 | \n", - "1.546942 | \n", - "1.681691 | \n", - "2.594644 | \n", - "0.007079 | \n", - "0.369586 | \n", - "0.185078 | \n", - "0.375829 | \n", - "0.183949 | \n", - "0.303257 | \n", - "0.291096 | \n", - "
217 rows × 13 columns
\n", - " \n",
- " nwb_file_name \n", - " name of the NWB file\n", - " | \n",
- " interval_list_name \n", - " descriptive name of this interval list\n", - " | \n",
- " valid_times \n", - " numpy array with start/end times for each interval\n", - " | \n",
- " pipeline \n", - " type of interval list (e.g. 'position', 'spikesorting_recording_v1')\n", - " |
---|---|---|---|
mediumnwb20230802_.nwb | \n", - "0e848c38-9105-4ea4-b6ba-dbdd5b46a088 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "0f91197e-bebb-4dc6-ad41-5bf89c3eed28 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "15c8a3e8-5ce9-4654-891e-6ee4109d6f1a | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "2b93bcd0-7b05-457c-8aab-c41ef543ecf2 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "2b9fbf14-74a0-4294-a805-26702340aac9 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "3a34ab35-eca6-406b-abab-c866a9f41fb9 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "3fecf0af-6ce7-474c-b933-9feb746993a0 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "45f6b9a1-eef3-46eb-866d-d0999afebda6 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "5c68f0f0-f577-4905-8a09-e4d171d0a22d | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "686d9951-1c0f-4d5e-9f5c-09e6fd8bdd4c | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "69f7d164-efc8-4621-b83c-77bc7459dbc2 | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
mediumnwb20230802_.nwb | \n", - "719e8a86-fcf1-4ffc-8c1f-ea912f67ad5d | \n", - "=BLOB= | \n", - "spikesorting_artifact_v1 |
...
\n", - "Total: 24
\n",
- " artifact_param_name \n", - " \n", - " | \n",
- " recording_id \n", - " \n", - " | \n",
- " artifact_id \n", - " \n", - " | \n",
- " artifact_params \n", - " \n", - " | \n",
- " analysis_file_name \n", - " name of the file\n", - " | \n",
- " object_id \n", - " Object ID for the processed recording in NWB file\n", - " |
---|---|---|---|---|---|
none | \n", - "f1427e00-2974-4301-b2ac-b4dc29277c51 | \n", - "0e848c38-9105-4ea4-b6ba-dbdd5b46a088 | \n", - "=BLOB= | \n", - "mediumnwb20230802_3BWJOEGAO1.nwb | \n", - "8366dcfd-bd90-470f-b08c-183bd44dcd1f |
none | \n", - "3c40ebdc-0b61-4105-9971-e1348bd49bc7 | \n", - "0f91197e-bebb-4dc6-ad41-5bf89c3eed28 | \n", - "=BLOB= | \n", - "mediumnwb20230802_85VG1GLTSR.nwb | \n", - "2d6e841c-4f98-42b7-9cbf-097fa8ba0766 |
none | \n", - "1e3f3707-613e-4a44-93f1-c7e5484112cd | \n", - "15c8a3e8-5ce9-4654-891e-6ee4109d6f1a | \n", - "=BLOB= | \n", - "mediumnwb20230802_H70AAE9UEI.nwb | \n", - "34550b0b-36c7-4dfb-b1ba-900fc9247da8 |
none | \n", - "72f70c5a-bc0f-46cb-b22f-33bafe2315df | \n", - "2b93bcd0-7b05-457c-8aab-c41ef543ecf2 | \n", - "=BLOB= | \n", - "mediumnwb20230802_OFQSUAGB74.nwb | \n", - "3a1b3df6-fa85-4006-ab9b-4bff45680516 |
none | \n", - "3a2c3eed-413a-452a-83c8-0e4648141bde | \n", - "2b9fbf14-74a0-4294-a805-26702340aac9 | \n", - "=BLOB= | \n", - "mediumnwb20230802_G0STLTBOSC.nwb | \n", - "ec5170e0-277a-4626-9120-b24574eae650 |
none | \n", - "d14ae25a-2796-4203-ba0b-f28768536cbe | \n", - "3a34ab35-eca6-406b-abab-c866a9f41fb9 | \n", - "=BLOB= | \n", - "mediumnwb20230802_IG73IGEYPA.nwb | \n", - "a3406f7e-1137-4c34-8715-e0323d074153 |
none | \n", - "76ee4ab3-da3e-4a68-9159-635fbf5f8a04 | \n", - "3fecf0af-6ce7-474c-b933-9feb746993a0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_LFO7YW7IIA.nwb | \n", - "cfe309be-3748-4dc8-9c71-81bd5c1067b7 |
none | \n", - "449b64e3-db0b-437e-a1b9-0d29928aa2dd | \n", - "45f6b9a1-eef3-46eb-866d-d0999afebda6 | \n", - "=BLOB= | \n", - "mediumnwb20230802_R19M5A499A.nwb | \n", - "68db8ac5-d008-4720-a3f8-162b0671313d |
none | \n", - "f07bc0b0-de6b-4424-8ef9-766213aaca26 | \n", - "5c68f0f0-f577-4905-8a09-e4d171d0a22d | \n", - "=BLOB= | \n", - "mediumnwb20230802_GF6Z0P5KYV.nwb | \n", - "80c14292-a179-4c0f-9ff9-79016038ce95 |
none | \n", - "328da21c-1d9c-41e2-9800-76b3484b707b | \n", - "686d9951-1c0f-4d5e-9f5c-09e6fd8bdd4c | \n", - "=BLOB= | \n", - "mediumnwb20230802_YSZXPEGP4X.nwb | \n", - "623a46f8-be44-434b-8aee-49155070f3f7 |
none | \n", - "b81f1ed9-fb2e-4f5c-93d8-d9cc0f118875 | \n", - "69f7d164-efc8-4621-b83c-77bc7459dbc2 | \n", - "=BLOB= | \n", - "mediumnwb20230802_QBQBH0I2OO.nwb | \n", - "101d753a-72fb-47a4-8734-962f8ef4f477 |
none | \n", - "aff78f2f-2ba0-412a-95cc-447c3a2f4683 | \n", - "719e8a86-fcf1-4ffc-8c1f-ea912f67ad5d | \n", - "=BLOB= | \n", - "mediumnwb20230802_42H3PR863Y.nwb | \n", - "6c5f3cd0-903a-42b5-ad68-261789bfd1a8 |
...
\n", - "Total: 24
\n",
- " merge_id \n", - " \n", - " | \n",
- " artifact_param_name \n", - " \n", - " | \n",
- " recording_id \n", - " \n", - " | \n",
- " artifact_id \n", - " \n", - " | \n",
- " sorting_id \n", - " \n", - " | \n",
- " curation_id \n", - " \n", - " | \n",
- " artifact_params \n", - " \n", - " | \n",
- " analysis_file_name \n", - " name of the file\n", - " | \n",
- " object_id \n", - " Object ID for the processed recording in NWB file\n", - " |
---|---|---|---|---|---|---|---|---|
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "f15351b3-d8e9-49a1-a306-4f366f1ee535 | \n", - "a5470cef-fc31-4723-9e1b-a024e73ef3b1 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_JVBY43AQFF.nwb | \n", - "f639dd9a-fc4f-483e-a9c5-f487ecd11292 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "f1427e00-2974-4301-b2ac-b4dc29277c51 | \n", - "0e848c38-9105-4ea4-b6ba-dbdd5b46a088 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_3BWJOEGAO1.nwb | \n", - "8366dcfd-bd90-470f-b08c-183bd44dcd1f |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "f07bc0b0-de6b-4424-8ef9-766213aaca26 | \n", - "5c68f0f0-f577-4905-8a09-e4d171d0a22d | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_GF6Z0P5KYV.nwb | \n", - "80c14292-a179-4c0f-9ff9-79016038ce95 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "e59e77e9-dd41-4f58-a75b-17271b78c0d8 | \n", - "8cc7a814-8e4a-4b87-ae71-80ca1f5771b1 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_8SB3X7Y9YA.nwb | \n", - "c880110b-1dbf-4cc1-99ff-3766ade81fed |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "d14ae25a-2796-4203-ba0b-f28768536cbe | \n", - "3a34ab35-eca6-406b-abab-c866a9f41fb9 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_IG73IGEYPA.nwb | \n", - "a3406f7e-1137-4c34-8715-e0323d074153 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "b81f1ed9-fb2e-4f5c-93d8-d9cc0f118875 | \n", - "69f7d164-efc8-4621-b83c-77bc7459dbc2 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_QBQBH0I2OO.nwb | \n", - "101d753a-72fb-47a4-8734-962f8ef4f477 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "aff78f2f-2ba0-412a-95cc-447c3a2f4683 | \n", - "719e8a86-fcf1-4ffc-8c1f-ea912f67ad5d | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_42H3PR863Y.nwb | \n", - "6c5f3cd0-903a-42b5-ad68-261789bfd1a8 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "a9b7cec0-1256-49cf-abf0-8c45fd155379 | \n", - "74270cba-36ee-4afb-ab50-2a6cc948e68c | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_5GUFKQ59T6.nwb | \n", - "498d52a8-47d1-41c2-bd45-2ac796fce4cd |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "a3f5b9e7-7c79-4eb4-b5ed-910191c615c2 | \n", - "f9cc9158-bea2-4de2-811d-1fb895c048a9 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_OQZ8C41NHS.nwb | \n", - "d49e9245-149c-4725-bd0f-d69b78e0a33a |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "9e332d82-1daf-4e92-bb50-12e4f9430875 | \n", - "9ed11db5-c42e-491a-8caf-7d9a37a65f13 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_30PFKCH9HH.nwb | \n", - "a45a4c86-d748-48f8-b406-4da381a74737 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "7f128981-6868-4976-ba20-248655dcac21 | \n", - "f4b9301f-bc91-455b-9474-c801093f3856 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_F9B938GB2N.nwb | \n", - "b06a3ec5-17a2-49a3-bd7f-475cb07081a0 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "none | \n", - "7cc37209-7c28-443d-8f65-d8b01ca49a9a | \n", - "f8650c19-8964-44ea-bd87-0245f1d2f934 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "=BLOB= | \n", - "mediumnwb20230802_XAQMO7WRC5.nwb | \n", - "38522acb-ba02-4fe1-b715-3c7485cca749 |
...
\n", - "Total: 552
\n",
- " recording_id \n", - " \n", - " | \n",
- " artifact_id \n", - " \n", - " | \n",
- " analysis_file_name \n", - " name of the file\n", - " | \n",
- " object_id \n", - " Object ID for the processed recording in NWB file\n", - " | \n",
- " artifact_param_name \n", - " \n", - " |
---|---|---|---|---|
04f3ecb4-a18c-4ffb-85d8-2f5f62d4d6d4 | \n", - "7a93bd27-5108-4290-89a2-2f8770664b35 | \n", - "mediumnwb20230802_F7HG9E9J3I.nwb | \n", - "16bded49-3fc2-4e37-9ac6-385eec091740 | \n", - "none |
1d2b5966-415a-4c65-955a-0e422d8b5b00 | \n", - "e4921df8-99b5-4f52-b3c2-988b9433e0cf | \n", - "mediumnwb20230802_C0I26JVUNV.nwb | \n", - "a07a4fcc-ac84-4d07-a036-b32c7e2ceb28 | \n", - "none |
1e3f3707-613e-4a44-93f1-c7e5484112cd | \n", - "15c8a3e8-5ce9-4654-891e-6ee4109d6f1a | \n", - "mediumnwb20230802_H70AAE9UEI.nwb | \n", - "34550b0b-36c7-4dfb-b1ba-900fc9247da8 | \n", - "none |
2402805a-04f9-4a88-9ccf-071376c8de19 | \n", - "d581b117-160e-4311-b096-7781a4de4394 | \n", - "mediumnwb20230802_5MEOIHZ5E5.nwb | \n", - "bf877f6e-5daf-4d70-ab23-fc2b7c132370 | \n", - "none |
24107d8c-ce26-4c77-8f6a-bf6955d8a3c7 | \n", - "d1925dc7-e3b0-47ef-adbc-1af129b67048 | \n", - "mediumnwb20230802_MKQ2TG5YZC.nwb | \n", - "7f55e942-7563-466a-ba56-b82ea5089be4 | \n", - "none |
257c077b-8f3b-4abb-a631-6b8084d6a1ea | \n", - "e289e03d-32ad-461a-a1cc-c88537343149 | \n", - "mediumnwb20230802_C2DEV7V2C6.nwb | \n", - "c19ca39e-50a4-4e87-a8e7-22ccf5979f27 | \n", - "none |
328da21c-1d9c-41e2-9800-76b3484b707b | \n", - "686d9951-1c0f-4d5e-9f5c-09e6fd8bdd4c | \n", - "mediumnwb20230802_YSZXPEGP4X.nwb | \n", - "623a46f8-be44-434b-8aee-49155070f3f7 | \n", - "none |
3a2c3eed-413a-452a-83c8-0e4648141bde | \n", - "2b9fbf14-74a0-4294-a805-26702340aac9 | \n", - "mediumnwb20230802_G0STLTBOSC.nwb | \n", - "ec5170e0-277a-4626-9120-b24574eae650 | \n", - "none |
3c40ebdc-0b61-4105-9971-e1348bd49bc7 | \n", - "0f91197e-bebb-4dc6-ad41-5bf89c3eed28 | \n", - "mediumnwb20230802_85VG1GLTSR.nwb | \n", - "2d6e841c-4f98-42b7-9cbf-097fa8ba0766 | \n", - "none |
449b64e3-db0b-437e-a1b9-0d29928aa2dd | \n", - "45f6b9a1-eef3-46eb-866d-d0999afebda6 | \n", - "mediumnwb20230802_R19M5A499A.nwb | \n", - "68db8ac5-d008-4720-a3f8-162b0671313d | \n", - "none |
72f70c5a-bc0f-46cb-b22f-33bafe2315df | \n", - "2b93bcd0-7b05-457c-8aab-c41ef543ecf2 | \n", - "mediumnwb20230802_OFQSUAGB74.nwb | \n", - "3a1b3df6-fa85-4006-ab9b-4bff45680516 | \n", - "none |
76ee4ab3-da3e-4a68-9159-635fbf5f8a04 | \n", - "3fecf0af-6ce7-474c-b933-9feb746993a0 | \n", - "mediumnwb20230802_LFO7YW7IIA.nwb | \n", - "cfe309be-3748-4dc8-9c71-81bd5c1067b7 | \n", - "none |
...
\n", - "Total: 24
\n",
- " merge_id \n", - " \n", - " | \n",
- " recording_id \n", - " \n", - " | \n",
- " sorting_id \n", - " \n", - " | \n",
- " curation_id \n", - " \n", - " | \n",
- " analysis_file_name \n", - " name of the file\n", - " | \n",
- " object_id \n", - " Object ID for the processed recording in NWB file\n", - " |
---|---|---|---|---|---|
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "f15351b3-d8e9-49a1-a306-4f366f1ee535 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_JVBY43AQFF.nwb | \n", - "f639dd9a-fc4f-483e-a9c5-f487ecd11292 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "f1427e00-2974-4301-b2ac-b4dc29277c51 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_3BWJOEGAO1.nwb | \n", - "8366dcfd-bd90-470f-b08c-183bd44dcd1f |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "f07bc0b0-de6b-4424-8ef9-766213aaca26 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_GF6Z0P5KYV.nwb | \n", - "80c14292-a179-4c0f-9ff9-79016038ce95 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "e59e77e9-dd41-4f58-a75b-17271b78c0d8 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_8SB3X7Y9YA.nwb | \n", - "c880110b-1dbf-4cc1-99ff-3766ade81fed |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "d14ae25a-2796-4203-ba0b-f28768536cbe | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_IG73IGEYPA.nwb | \n", - "a3406f7e-1137-4c34-8715-e0323d074153 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "b81f1ed9-fb2e-4f5c-93d8-d9cc0f118875 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_QBQBH0I2OO.nwb | \n", - "101d753a-72fb-47a4-8734-962f8ef4f477 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "aff78f2f-2ba0-412a-95cc-447c3a2f4683 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_42H3PR863Y.nwb | \n", - "6c5f3cd0-903a-42b5-ad68-261789bfd1a8 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "a9b7cec0-1256-49cf-abf0-8c45fd155379 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_5GUFKQ59T6.nwb | \n", - "498d52a8-47d1-41c2-bd45-2ac796fce4cd |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "a3f5b9e7-7c79-4eb4-b5ed-910191c615c2 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_OQZ8C41NHS.nwb | \n", - "d49e9245-149c-4725-bd0f-d69b78e0a33a |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "9e332d82-1daf-4e92-bb50-12e4f9430875 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_30PFKCH9HH.nwb | \n", - "a45a4c86-d748-48f8-b406-4da381a74737 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "7f128981-6868-4976-ba20-248655dcac21 | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_F9B938GB2N.nwb | \n", - "b06a3ec5-17a2-49a3-bd7f-475cb07081a0 |
485a4ddf-332d-35b5-3ad4-0561736c1844 | \n", - "7cc37209-7c28-443d-8f65-d8b01ca49a9a | \n", - "08a302b6-5505-40fa-b4d5-62162f8eef58 | \n", - "0 | \n", - "mediumnwb20230802_XAQMO7WRC5.nwb | \n", - "38522acb-ba02-4fe1-b715-3c7485cca749 |
...
\n", - "Total: 552