From 07bcbcf6d358fbc06cad7fbcb54abf4c60ce98ed Mon Sep 17 00:00:00 2001 From: Weina Ji Date: Thu, 12 Sep 2024 11:13:51 +0200 Subject: [PATCH] use local dummpy calibration files --- tests/scientific/test_simulation.py | 4 ++-- .../v5_gapjunctions/test_g_pas_passive.hdf5 | Bin 0 -> 6636 bytes .../v5_gapjunctions/test_holding_per_gid.hdf5 | Bin 0 -> 3472 bytes 3 files changed, 2 insertions(+), 2 deletions(-) create mode 100644 tests/simulations/v5_gapjunctions/test_g_pas_passive.hdf5 create mode 100644 tests/simulations/v5_gapjunctions/test_holding_per_gid.hdf5 diff --git a/tests/scientific/test_simulation.py b/tests/scientific/test_simulation.py index 2d6d4cb4..b35d05c0 100644 --- a/tests/scientific/test_simulation.py +++ b/tests/scientific/test_simulation.py @@ -139,8 +139,8 @@ def test_v5_gap_junction_corrections(capsys): "determanisitc_stoch": True, "procedure_type": "validation_sim", "gjc": 0.2, - "load_g_pas_file": "/gpfs/bbp.cscs.ch/project/proj55/amsalem/gap_junctions/circ19_11_2019_gjs_19_20_20/rm_correction/Circ_mc2_Rt_Remove_ch_all_Det_stoch_True_Dis_holding_False_Correc_type_impedance_tool_Cm0p01_Num_iter_10/num_0/g_pas_passive.hdf5", # noqa - "manual_MEComboInfo_file": "/gpfs/bbp.cscs.ch/project/proj55/amsalem/gap_junctions/circ19_11_2019_gjs_19_20_20_new_holding/find_holding_current/vc_ampFile/Circ_mc2_Rt_Remove_ch_none_Det_stoch_True_Dis_holding_False_gjc0p2_Change_mecomb_False_manual_MEComboInfoFile_False_Load_g_pas_True_Correc_iter_loadlast/num_0/holding_per_gid.hdf5" # noqa + "load_g_pas_file": "$CURRENT_DIR/test_g_pas_passive.hdf5", + "manual_MEComboInfo_file": "$CURRENT_DIR/test_holding_per_gid.hdf5" } with NamedTemporaryFile("w", dir=str(SIM_DIR / "v5_gapjunctions"), suffix='.json', delete=False) as tmp_config: diff --git a/tests/simulations/v5_gapjunctions/test_g_pas_passive.hdf5 b/tests/simulations/v5_gapjunctions/test_g_pas_passive.hdf5 new file mode 100644 index 0000000000000000000000000000000000000000..4f4c58448190685dda4cc0bd4a39379112b40813 GIT binary patch literal 6636 zcmeD5aB<`1lHy_j0S*oZ76t(@6Gr@pf;W;75f~pPp8#brLg@}Dy@CnCU}OM61_lYJ zxFFPgbaf#?uC5F~l`!*RG*lbI16Bx&112y^kEjsvaCHm-c{l>3nGa`n#HeBhq1Dbwd-ZRiM0yC+V zeuMq|T|j9VmhKdw=@xE2S~`ZgW0Xb>0bJ!k06Roo0W^OTDhEFBLe#_J1J#yM-f#~A zT;;$7X!?QqKhem-%)o?t^%#0NpaD&{uyO!B9mCu)N~4AVu5uuP8=|fPn!gE^10K)@ z%xF1)8oncihh7fA`bRUM=?4}Li52;I(FU;^26~2?ATd~eb$}@#kwz~E44~;2W-fX< zCeip2qnwd}6%rTFfMbOAa2XjP0?=S(fYHoAd60~tf;_N~4FU=b;v5X(^LP zJQFj-SPrOp%uGxZ1R-ibMnSZK`5jQ5gM&g(R~Gz(!(Bto6`*Cq4v4S~@R7!85Z5Eu=CVG;r=vldu9elpQwR!cuY3;>R1q>KOn literal 0 HcmV?d00001 diff --git a/tests/simulations/v5_gapjunctions/test_holding_per_gid.hdf5 b/tests/simulations/v5_gapjunctions/test_holding_per_gid.hdf5 new file mode 100644 index 0000000000000000000000000000000000000000..7a35495c4893f4c2c2207206458c7fefcd055e5f GIT binary patch literal 3472 zcmeD5aB<`1lHy_j0S*oZ76t(@6Gr@pf(g735f~pPp8#brLg@}Dy@CnCU}OM61_lYJ zxFFPgbaf#?uC5F~l`!*RG*lbI16Bx&112y^kEjsvaCHm-c{l>0jE8XoC8b&i8QYC>%j~$C6gR^7$(Zm(=V)) z?SQ5qm^TgdjKEA-dFla^Ad?RE^LGKIVOY9TfTmlx`Dp2wOlyX{HeBUE06WC%1HOWT0{^)?Q%c^nr>m{qo-q-J4R{L z5MX3rg~SOo;9w;yEF77EEnN^>P{AHr<~lH#a5I?vhnBOfKv9r96B83y3kS4i%*@yU fZDFIA3^Pz2Fvxi5^@{=bAamf*an4usV}bhtUw&xv literal 0 HcmV?d00001