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World Bank Reproducibility Training

by Garret Christensen, Fernando Hoces de la Guardia, and the World Bank

UC Berkeley (Berkeley Initative for Transparency in the Social Sciences, Berkeley Institute for Data Science)

Materials for the January 2018 Reproducibility Training at the World Bank

The numbered files/directories will take you through the workshop in order.

First, 1-Intro features a set of slides (Beamer/LaTeX slides rendered as PDF) that discuss the reproducibility crisis in the social sciences.

Second, 2-GitDemo.md is an introduction to version control with Git.


Installation Instructions

The workshop will introduce you to a tool that can help you make your workflow more reproducible: version control (Git/GitHub). You are required to install the following software programs either on your personal laptop or Bank laptop before coming to the workshop for the hands-on exercises. (please remember to bring the laptop too!)

1. Version Control with Git and the Github Desktop app

Version control is a powerful way to carefully track revisions to your documents as well as to manage collaboration. Git and Github Desktop are packaged together here. Git is the command line tool, and Github Desktop is a GUI version of the same tool. There are actually a whole bunch of GUI apps that can act as front ends, so you might find later that you prefer another, but we'll stick with Github Desktop for the demo. Currently, the only Git app supported for the WBG machines is GitHub Desktop.

Optional: Specifics for Specifics Platforms

Note that Github Desktop works on Mac and Windows. If you're a Linux user, you might try one of these. Also if you're a Windows user, the command line tool that comes with Github Desktop is not the greatest, so you might want to download this alternative. If you've never used the command line before or any of this is confusing, don't worry about it and we'll try to clear it up at the workshop.

2. A good text editor

Writing good code is facilitated by a good text editor. You can get away without one because you almost certainly already have a program on your computer that can save simple ASCII text files (Notepad for Windows, or TextEdit for Mac--but change the default from Rich Text to Plain Text) but modern text editors do syntax highlighting, auto-complete, and a bunch of other cool stuff for you. I suggest Atom. You can extend its functionality by going to settings and adding packages (one to render Markdown as PDF might be especially helpful.)

3. R or Python, Your Choice

Depending on which session you'd like to attend, you'll either need to install R and R Studio, or Python and Jupyter Notebook which are included in Anaconda.

Workshop Agenda

Time Session Speaker
9:15-10:00 Welcome and introductions
10:00-10:15 COFFEE BREAK
10:15-11:45 Breakout Sessions: R or Python for Dynamic Documents Fernando Hoces de la Guardia, Samuel Paul Fraiberger
11:45-12:45 LUNCH
12:45-2:30 Version control part 1 Garret Christensen
2:30-2:45 COFFEE BREAK
2:45-3:30 Version control part 2; Collaboration with Git and Github Garret Christensen
3:30-4:00 GitHub for TTLs - How to get started with World Bank GitHub account Mireille Raad, Dunstan Matekenya
4:00-4:45 GitHub for TTLs - How to use GitHub as a collaboration and project management tool Mireille Raad, Dunstan Matekenya
4:45-5:00 Closing Discussion

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