diff --git a/.github/workflows/gadi_deploy.yml b/.github/workflows/gadi_deploy.yml index a5cfa58..5133b24 100644 --- a/.github/workflows/gadi_deploy.yml +++ b/.github/workflows/gadi_deploy.yml @@ -15,7 +15,7 @@ jobs: uses: actions/checkout@v4.1.7 - name: Sync repository to Gadi ### Latest at time of writing - uses: up9cloud/action-rsync@v1.3 + uses: up9cloud/action-rsync@v1.4 env: HOST: gadi.nci.org.au TARGET: ${{secrets.GADI_REPO_PATH}} @@ -32,8 +32,5 @@ jobs: export RELEASE=${{ github.event.inputs.release_version }} cd bin qsub -v version=${RELEASE} build_all.sh - cd .. - git add src/access_nri_intake/cat - git commit "Update catalog to $RELEASE" diff --git a/bin/build_all.sh b/bin/build_all.sh index 138ef10..85b8bf4 100755 --- a/bin/build_all.sh +++ b/bin/build_all.sh @@ -1,8 +1,9 @@ #!/bin/bash -l -#PBS -P tm70 +#PBS -P iq82 #PBS -l storage=gdata/tm70+gdata/xp65+gdata/ik11+gdata/cj50+gdata/hh5+gdata/p73+gdata/dk92 #PBS -q normal +#PBS -W block=true #PBS -l walltime=03:00:00 #PBS -l mem=192gb #PBS -l ncpus=48 @@ -24,10 +25,11 @@ if [ ! $# -eq 0 ]; then version=$1 fi -conda activate access-nri-intake-test +module use /g/data/xp65/public/modules +module load conda/access-med-0.6 OUTPUT_BASE_PATH=/g/data/xp65/public/apps/access-nri-intake-catalog -CONFIG_DIR=/g/data/tm70/ds0092/projects/access-nri-intake-catalog/config +CONFIG_DIR=/g/data/xp65/admin/access-nri-intake-catalog/config CONFIGS=( cmip5.yaml cmip6.yaml access-om2.yaml access-cm2.yaml access-esm1-5.yaml ) # erai.yaml config_paths=( "${CONFIGS[@]/#/${CONFIG_DIR}/}" )