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.pre-commit-config.yaml
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.pre-commit-config.yaml
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# See https://pre-commit.com for more information
# See https://pre-commit.com/hooks.html for more hooks
repos:
- repo: https://github.com/pre-commit/pre-commit-hooks
rev: v4.6.0
hooks:
- id: trailing-whitespace
exclude: "^.+\\.pbtxt$"
- id: end-of-file-fixer
exclude: "^.+\\.pbtxt$"
- id: check-yaml
- id: check-json
- id: check-added-large-files
args: ["--maxkb=1024", "--enforce-all"]
exclude: |
(?x)^(
source/tests/infer/dipolecharge_e.pbtxt|
source/tests/infer/deeppolar_new.pbtxt
)$
- id: check-merge-conflict
- id: check-symlinks
- id: check-toml
# Python
- repo: https://github.com/PyCQA/isort
rev: 5.13.2
hooks:
- id: isort
files: \.py$
exclude: ^source/3rdparty
- repo: https://github.com/astral-sh/ruff-pre-commit
# Ruff version.
rev: v0.5.5
hooks:
- id: ruff
args: ["--fix"]
exclude: ^source/3rdparty
types_or: [python, pyi, jupyter]
- id: ruff-format
exclude: ^source/3rdparty
types_or: [python, pyi, jupyter]
# numpydoc
- repo: https://github.com/Carreau/velin
rev: 0.0.12
hooks:
- id: velin
args: ["--write"]
exclude: ^source/3rdparty
# Python inside docs
- repo: https://github.com/asottile/blacken-docs
rev: 1.18.0
hooks:
- id: blacken-docs
# C++
- repo: https://github.com/pre-commit/mirrors-clang-format
rev: v18.1.8
hooks:
- id: clang-format
exclude: ^source/3rdparty|source/lib/src/gpu/cudart/.+\.inc
# markdown, yaml, CSS, javascript
- repo: https://github.com/pre-commit/mirrors-prettier
rev: v4.0.0-alpha.8
hooks:
- id: prettier
types_or: [markdown, yaml, css]
# workflow files cannot be modified by pre-commit.ci
exclude: ^(source/3rdparty|\.github/workflows|\.clang-format)
# Shell
- repo: https://github.com/scop/pre-commit-shfmt
rev: v3.8.0-1
hooks:
- id: shfmt
# CMake
- repo: https://github.com/cheshirekow/cmake-format-precommit
rev: v0.6.13
hooks:
- id: cmake-format
#- id: cmake-lint
- repo: https://github.com/njzjz/mirrors-bibtex-tidy
rev: v1.13.0
hooks:
- id: bibtex-tidy
args:
- --curly
- --numeric
- --align=13
- --blank-lines
# disable sort: the order of keys and fields has explict meanings
#- --sort=key
- --duplicates=key,doi,citation,abstract
- --merge=combine
#- --sort-fields
#- --strip-comments
- --trailing-commas
- --encode-urls
- --remove-empty-fields
- --wrap=80
# license header
- repo: https://github.com/Lucas-C/pre-commit-hooks
rev: v1.5.5
hooks:
# C++, js
- id: insert-license
files: \.(c|cc|cpp|js|ts|h|hpp)$
args:
- --license-filepath
- .license-header.txt
- --comment-style
- //
- --no-extra-eol
exclude: ^source/3rdparty|source/lib/src/gpu/cudart/.+\.inc
# CSS
- id: insert-license
files: \.(css|scss)$
args:
- --license-filepath
- .license-header.txt
- --comment-style
- /*| *| */
- --no-extra-eol
# Python
- id: insert-license
files: \.(py|pyx)$
args:
- --license-filepath
- .license-header.txt
- --comment-style
- "#"
- --no-extra-eol
exclude: ^source/3rdparty
# HTML
- id: insert-license
files: \.(html|vue|xml)$
args:
- --license-filepath
- .license-header.txt
- --comment-style
- <!--| ~| -->
- --no-extra-eol
- repo: local
hooks:
- id: disallow-caps
name: Disallow improper capitalization
language: pygrep
entry: DeepMD|DeepMd|Pytorch|Tensorflow|Numpy|Github|Lammps|I-Pi|I-PI|i-Pi
# unclear why PairDeepMD is used instead of PairDeePMD
exclude: .pre-commit-config.yaml|source/lmp
# customized pylint rules
- repo: https://github.com/pylint-dev/pylint/
rev: v3.2.6
hooks:
- id: pylint
entry: env PYTHONPATH=source/checker pylint
files: ^deepmd/
ci:
autoupdate_branch: devel